RNA–Protein interactions for RNA: ENST00000261250.7

C12orf4-201, Transcript of chromosome 12 open reading frame 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf4, Length 3,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-201ENST00000261250 CHIC1Q5VXU3 224 aa10.9□□□□□ -0.67
C12orf4-201ENST00000261250 AEBP2Q6ZN18 517 aaPredicted RBP10.76□□□□□ -0.69
C12orf4-201ENST00000261250 NISCHQ9Y2I1 1504 aa10.13□□□□□ -0.79
C12orf4-201ENST00000261250 CCDC180Q9P1Z9 1646 aa9.59□□□□□ -0.87
C12orf4-201ENST00000261250 PHF23Q9BUL5 403 aaPredicted RBP9.45□□□□□ -0.9
C12orf4-201ENST00000261250 SENP3Q9H4L4 574 aaPredicted RBP9.37□□□□□ -0.91
C12orf4-201ENST00000261250 ABCC9O60706 1549 aa9.11□□□□□ -0.95
C12orf4-201ENST00000261250 PLPPR3Q6T4P5 718 aa9.05□□□□□ -0.96
C12orf4-201ENST00000261250 UNC13AQ9UPW8 1703 aa9□□□□□ -0.97
C12orf4-201ENST00000261250 RB1CC1Q8TDY2 1594 aa8.96□□□□□ -0.97
C12orf4-201ENST00000261250 MYO15BQ96JP2 1530 aa8.95□□□□□ -0.98
C12orf4-201ENST00000261250 NACADO15069 1562 aa8.92□□□□□ -0.98
C12orf4-201ENST00000261250 SHROOM4Q9ULL8 1493 aa8.91□□□□□ -0.98
C12orf4-201ENST00000261250 BICRAQ9NZM4 1560 aa8.83□□□□□ -1
C12orf4-201ENST00000261250 DNAJC5BQ9UF47 199 aa8.78□□□□□ -1
C12orf4-201ENST00000261250 DCAF1Q9Y4B6 1507 aa8.68□□□□□ -1.02
C12orf4-201ENST00000261250 CC2D2AQ9P2K1 1620 aa8.55□□□□□ -1.04
C12orf4-201ENST00000261250 FOXD1Q16676 465 aa8.5□□□□□ -1.05
C12orf4-201ENST00000261250 EIF4G1Q04637 1599 aaKnown RBP8.49□□□□□ -1.05
C12orf4-201ENST00000261250 ZCCHC6Q5VYS8 1495 aaKnown RBP8.42□□□□□ -1.06
C12orf4-201ENST00000261250 CUX2O14529 1486 aa8.38□□□□□ -1.07
C12orf4-201ENST00000261250 CECR2Q9BXF3 1484 aa8.38□□□□□ -1.07
C12orf4-201ENST00000261250 ADRA2BP18089 450 aa8.36□□□□□ -1.07
C12orf4-201ENST00000261250 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
C12orf4-201ENST00000261250 PPP6R1Q9UPN7 881 aa8.26□□□□□ -1.09
C12orf4-201ENST00000261250 THOC2Q8NI27 1593 aaKnown RBP8.23□□□□□ -1.09
C12orf4-201ENST00000261250 HMGXB3Q12766 1538 aa8.2□□□□□ -1.1
C12orf4-201ENST00000261250 PEG3Q9GZU2 1588 aa8.2□□□□□ -1.1
C12orf4-201ENST00000261250 PIAS4Q8N2W9 510 aaPredicted RBP8.2□□□□□ -1.1
C12orf4-201ENST00000261250 SCRIBQ14160 1630 aa8.19□□□□□ -1.1
C12orf4-201ENST00000261250 PABPN1Q86U42 306 aaKnown RBP eCLIP8.17□□□□□ -1.1
C12orf4-201ENST00000261250 NCAPD3P42695 1498 aa8.15□□□□□ -1.11
C12orf4-201ENST00000261250 SMARCA2P51531 1590 aa8.13□□□□□ -1.11
C12orf4-201ENST00000261250 LAMC3Q9Y6N6 1575 aa8.08□□□□□ -1.12
C12orf4-201ENST00000261250 KIF21AQ7Z4S6 1674 aa8.03□□□□□ -1.12
C12orf4-201ENST00000261250 SMARCA4P51532 1647 aa8.03□□□□□ -1.12
C12orf4-201ENST00000261250 WDR62O43379 1518 aa8.01□□□□□ -1.13
C12orf4-201ENST00000261250 PRDM2Q13029 1718 aa8□□□□□ -1.13
C12orf4-201ENST00000261250 NCBP3Q53F19 620 aaKnown RBP7.99□□□□□ -1.13
C12orf4-201ENST00000261250 ATAD2BQ9ULI0 1458 aa7.98□□□□□ -1.13
C12orf4-201ENST00000261250 MSH5O43196 834 aa7.96□□□□□ -1.14
C12orf4-201ENST00000261250 PPP4R3CPQ6ZMV5 832 aa7.95□□□□□ -1.14
C12orf4-201ENST00000261250 SCAF1Q9H7N4 1312 aaKnown RBP7.94□□□□□ -1.14
C12orf4-201ENST00000261250 KCNA4P22459 653 aa7.92□□□□□ -1.14
C12orf4-201ENST00000261250 BAZ1AQ9NRL2 1556 aaPredicted RBP7.91□□□□□ -1.14
C12orf4-201ENST00000261250 ERCC6Q03468 1493 aa7.85□□□□□ -1.15
C12orf4-201ENST00000261250 NESP48681 1621 aa7.83□□□□□ -1.16
C12orf4-201ENST00000261250 MRC2Q9UBG0 1479 aa7.83□□□□□ -1.16
C12orf4-201ENST00000261250 RIMBP3CA6NJZ7 1639 aa7.81□□□□□ -1.16
C12orf4-201ENST00000261250 RIMBP3BA6NNM3 1639 aa7.81□□□□□ -1.16
C12orf4-201ENST00000261250 RIMBP3Q9UFD9 1639 aa7.81□□□□□ -1.16
C12orf4-201ENST00000261250 WDR97A6NE52 1622 aa7.8□□□□□ -1.16
C12orf4-201ENST00000261250 BAZ1BQ9UIG0 1483 aaKnown RBP7.77□□□□□ -1.16
C12orf4-201ENST00000261250 PDS5BQ9NTI5 1447 aa7.76□□□□□ -1.17
C12orf4-201ENST00000261250 SLC4A1APQ9BWU0 796 aaKnown RBP7.73□□□□□ -1.17
C12orf4-201ENST00000261250 CNKSR2Q8WXI2 1034 aa7.72□□□□□ -1.17
C12orf4-201ENST00000261250 EHMT2Q96KQ7 1210 aa7.71□□□□□ -1.18
C12orf4-201ENST00000261250 CFTRP13569 1480 aa7.7□□□□□ -1.18
C12orf4-201ENST00000261250 MROH2BQ7Z745 1585 aa7.7□□□□□ -1.18
C12orf4-201ENST00000261250 CADPSQ9ULU8 1353 aa7.68□□□□□ -1.18
C12orf4-201ENST00000261250 TARBP1Q13395 1621 aaKnown RBP7.67□□□□□ -1.18
C12orf4-201ENST00000261250 CHD1O14646 1710 aa7.66□□□□□ -1.18
C12orf4-201ENST00000261250 CLASP1Q7Z460 1538 aa7.66□□□□□ -1.18
C12orf4-201ENST00000261250 URB2Q14146 1524 aaKnown RBP7.66□□□□□ -1.18
C12orf4-201ENST00000261250 CEP164Q9UPV0 1460 aa7.65□□□□□ -1.18
C12orf4-201ENST00000261250 ARHGEF11O15085 1522 aa7.65□□□□□ -1.19
C12orf4-201ENST00000261250 EIF4G3O43432 1585 aaKnown RBP7.63□□□□□ -1.19
C12orf4-201ENST00000261250 TOP2AP11388 1531 aaKnown RBP7.63□□□□□ -1.19
C12orf4-201ENST00000261250 WIZO95785 1651 aa7.62□□□□□ -1.19
C12orf4-201ENST00000261250 RSF1Q96T23 1441 aaPredicted RBP7.62□□□□□ -1.19
C12orf4-201ENST00000261250 NPM3O75607 178 aaKnown RBP7.62□□□□□ -1.19
C12orf4-201ENST00000261250 DCAF8L2P0C7V8 631 aa7.61□□□□□ -1.19
C12orf4-201ENST00000261250 IFT140Q96RY7 1462 aa7.6□□□□□ -1.19
C12orf4-201ENST00000261250 FANCD2Q9BXW9 1451 aa7.6□□□□□ -1.19
C12orf4-201ENST00000261250 DNMBPQ6XZF7 1577 aa7.57□□□□□ -1.2
C12orf4-201ENST00000261250 ABCC8Q09428 1581 aa7.57□□□□□ -1.2
C12orf4-201ENST00000261250 ARAP1Q96P48 1450 aa7.56□□□□□ -1.2
C12orf4-201ENST00000261250 SHROOM2Q13796 1616 aa7.55□□□□□ -1.2
C12orf4-201ENST00000261250 KIF13AQ9H1H9 1805 aa7.52□□□□□ -1.21
C12orf4-201ENST00000261250 PBRM1Q86U86 1689 aa7.51□□□□□ -1.21
C12orf4-201ENST00000261250 TOPBP1Q92547 1522 aa7.51□□□□□ -1.21
C12orf4-201ENST00000261250 RNF216Q9NWF9 866 aaPredicted RBP7.48□□□□□ -1.21
C12orf4-201ENST00000261250 MAPK8IP2Q13387 824 aaPredicted RBP7.47□□□□□ -1.21
C12orf4-201ENST00000261250 OSCARQ8IYS5 282 aa7.47□□□□□ -1.21
C12orf4-201ENST00000261250 ABCA5Q8WWZ7 1642 aa7.47□□□□□ -1.21
C12orf4-201ENST00000261250 ZNF608Q9ULD9 1512 aaPredicted RBP7.47□□□□□ -1.21
C12orf4-201ENST00000261250 SYNJ1O43426 1573 aa7.45□□□□□ -1.22
C12orf4-201ENST00000261250 MAGI1Q96QZ7 1491 aaPredicted RBP7.43□□□□□ -1.22
C12orf4-201ENST00000261250 DMRT2Q9Y5R5 561 aa7.43□□□□□ -1.22
C12orf4-201ENST00000261250 CSRNP3Q8WYN3 585 aa7.4□□□□□ -1.22
C12orf4-201ENST00000261250 POLA1P09884 1462 aaPredicted RBP7.37□□□□□ -1.23
C12orf4-201ENST00000261250 TRIM41Q8WV44 630 aa7.37□□□□□ -1.23
C12orf4-201ENST00000261250 MAPKBP1O60336 1514 aa7.37□□□□□ -1.23
C12orf4-201ENST00000261250 FOXD4L1Q9NU39 408 aa7.36□□□□□ -1.23
C12orf4-201ENST00000261250 BIVM-ERCC5R4GMW8 1640 aa7.35□□□□□ -1.23
C12orf4-201ENST00000261250 CCDC88BA6NC98 1476 aa7.35□□□□□ -1.23
C12orf4-201ENST00000261250 SYNJ2O15056 1496 aa7.35□□□□□ -1.23
C12orf4-201ENST00000261250 ADAMTS12P58397 1594 aa7.35□□□□□ -1.23
C12orf4-201ENST00000261250 PPRC1Q5VV67 1664 aaKnown RBP7.34□□□□□ -1.23
C12orf4-201ENST00000261250 HOXD11P31277 338 aaPredicted RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms