Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 RNA5SP223-201ENST00000365174 120 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 SNORA5.1-201ENST00000384275 131 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 MIR1182-201ENST00000408363 97 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 COX6B1P1-201ENST00000415962 213 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 RPL17P36-201ENST00000420302 549 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AC005002.2-201ENST00000438228 269 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AC009296.1-201ENST00000443146 155 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 TPT1P12-201ENST00000448968 492 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 RPL7P47-201ENST00000497299 556 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 MED28P6-201ENST00000558776 231 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AL162424.1-201ENST00000602325 221 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AC090132.2-201ENST00000615881 347 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AC027309.3-201ENST00000623419 351 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AC021753.1-201ENST00000635724 168 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 AC025031.4-201ENST00000621248 3271 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 MAPK10-304ENST00000641341 3984 ntBASIC5.23□□□□□ -1.57
PCDHB9Q9Y5E1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 AC083843.3-201ENST00000623679 2186 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 Y_RNA.122-201ENST00000363331 96 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 RNU6-1020P-201ENST00000363684 107 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 Y_RNA.170-201ENST00000363746 110 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 RNY1P5-201ENST00000383890 115 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 AC244098.2-201ENST00000422068 99 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 AC007919.1-201ENST00000429380 217 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 PTMAP3-201ENST00000447474 330 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 RN7SL346P-201ENST00000491561 294 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 RNU2-31P-201ENST00000516954 155 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 RNA5SP165-201ENST00000517142 115 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 SNORD113-5-201ENST00000607261 78 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 SCARNA4-202ENST00000625402 129 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 ZNF826P-207ENST00000622273 1910 ntBASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHB9Q9Y5E1 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PCDHB9Q9Y5E1 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 RN7SKP104-201ENST00000362605 328 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 RNU6-740P-201ENST00000364734 105 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 Y_RNA.292-201ENST00000364904 97 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 RNU6-47P-201ENST00000383866 107 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 RNU6-741P-201ENST00000383889 107 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 RNU6-318P-201ENST00000384283 103 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 RNU6-72P-201ENST00000384285 79 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 MIR1290-201ENST00000408735 78 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 AC098614.2-201ENST00000426040 255 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 EIF1P2-201ENST00000428233 350 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 AC016700.2-201ENST00000446011 156 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 snoU109.2-201ENST00000459316 135 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 AC109925.1-201ENST00000478069 331 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 RPL23AP75-201ENST00000491601 451 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 HMGB3P16-201ENST00000508037 287 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 SNORD116-28-201ENST00000516123 91 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 RN7SKP272-201ENST00000516988 232 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 MIR548AI-201ENST00000579940 88 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 RPL23AP88-201ENST00000605759 454 ntBASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHB9Q9Y5E1 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms