Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 Z82202.1-201ENST00000623446 1880 ntBASIC16.69■□□□□ 0.26
CDH20Q9HBT6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 KRT17P2-201ENST00000300992 1314 ntBASIC16.69■□□□□ 0.26
CDH20Q9HBT6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.69■□□□□ 0.26
CDH20Q9HBT6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 AC004951.3-201ENST00000418645 1148 ntBASIC16.68■□□□□ 0.26
CDH20Q9HBT6 TSPY7P-201ENST00000431358 1114 ntBASIC16.68■□□□□ 0.26
CDH20Q9HBT6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 NUDT16P1-203ENST00000513809 620 ntBASIC16.68■□□□□ 0.26
CDH20Q9HBT6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.68■□□□□ 0.26
CDH20Q9HBT6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CDH20Q9HBT6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 MIR6786-201ENST00000616843 113 ntBASIC16.67■□□□□ 0.26
CDH20Q9HBT6 AC011298.2-201ENST00000617989 482 ntBASIC16.67■□□□□ 0.26
CDH20Q9HBT6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 SDHAP1-207ENST00000440850 2000 ntBASIC16.67■□□□□ 0.26
CDH20Q9HBT6 FSCN1P1-201ENST00000568912 1481 ntBASIC16.67■□□□□ 0.26
CDH20Q9HBT6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH20Q9HBT6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 Z85996.1-201ENST00000494644 937 ntBASIC16.66■□□□□ 0.26
CDH20Q9HBT6 RCC2P6-201ENST00000526625 1557 ntBASIC16.66■□□□□ 0.26
CDH20Q9HBT6 MIR4497-201ENST00000583208 89 ntBASIC16.66■□□□□ 0.26
CDH20Q9HBT6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH20Q9HBT6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH20Q9HBT6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms