Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.99■□□□□ 0.95
COL1A2P08123 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.99■□□□□ 0.95
COL1A2P08123 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.99■□□□□ 0.95
COL1A2P08123 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.99■□□□□ 0.95
COL1A2P08123 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.99■□□□□ 0.95
COL1A2P08123 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
COL1A2P08123 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.99■□□□□ 0.95
COL1A2P08123 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
COL1A2P08123 GPAT2P1-201ENST00000444924 1672 ntBASIC20.99■□□□□ 0.95
COL1A2P08123 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL1A2P08123 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.99■□□□□ 0.95
COL1A2P08123 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A2P08123 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.98■□□□□ 0.95
COL1A2P08123 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.98■□□□□ 0.95
COL1A2P08123 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
COL1A2P08123 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COL1A2P08123 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.98■□□□□ 0.95
COL1A2P08123 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A2P08123 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A2P08123 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A2P08123 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A2P08123 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL1A2P08123 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.98■□□□□ 0.95
COL1A2P08123 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
COL1A2P08123 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 AL023284.2-201ENST00000405850 579 ntBASIC20.97■□□□□ 0.95
COL1A2P08123 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.97■□□□□ 0.95
COL1A2P08123 AL359075.1-203ENST00000462729 1002 ntBASIC20.97■□□□□ 0.95
COL1A2P08123 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.97■□□□□ 0.95
COL1A2P08123 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.97■□□□□ 0.95
COL1A2P08123 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.97■□□□□ 0.95
COL1A2P08123 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.97■□□□□ 0.95
COL1A2P08123 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
COL1A2P08123 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
COL1A2P08123 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
COL1A2P08123 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.97■□□□□ 0.95
COL1A2P08123 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COL1A2P08123 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COL1A2P08123 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.97■□□□□ 0.95
COL1A2P08123 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.97■□□□□ 0.95
COL1A2P08123 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COL1A2P08123 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL1A2P08123 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
COL1A2P08123 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.97■□□□□ 0.95
COL1A2P08123 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.97■□□□□ 0.95
COL1A2P08123 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.97■□□□□ 0.95
COL1A2P08123 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.96■□□□□ 0.95
COL1A2P08123 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.96■□□□□ 0.95
COL1A2P08123 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
COL1A2P08123 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL1A2P08123 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL1A2P08123 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.96■□□□□ 0.95
COL1A2P08123 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
COL1A2P08123 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.96■□□□□ 0.95
COL1A2P08123 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL1A2P08123 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL1A2P08123 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COL1A2P08123 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL1A2P08123 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COL1A2P08123 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.96■□□□□ 0.95
COL1A2P08123 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.96■□□□□ 0.95
COL1A2P08123 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.96■□□□□ 0.95
COL1A2P08123 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.96■□□□□ 0.95
COL1A2P08123 AL121956.5-201ENST00000625261 221 ntBASIC20.96■□□□□ 0.95
COL1A2P08123 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
COL1A2P08123 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COL1A2P08123 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
COL1A2P08123 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
COL1A2P08123 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A2P08123 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A2P08123 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A2P08123 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A2P08123 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL1A2P08123 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms