Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 AC233263.1-201ENST00000578059 224 ntBASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 Six3os1_6.1-201ENST00000620790 196 ntBASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 AL023875.1-201ENST00000640777 796 ntBASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 AC018445.3-201ENST00000624177 1945 ntBASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC13.89□□□□□ -0.19
TRGV1A0A0A0MS02 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 KRASP1-201ENST00000407852 552 ntBASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 MTDHP1-201ENST00000605323 784 ntBASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 AC006058.3-201ENST00000606217 1069 ntBASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRGV1A0A0A0MS02 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 AP000974.1-201ENST00000623909 2387 ntBASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRGV1A0A0A0MS02 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms