Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 INM1YHR046C 888 nt8.28□□□□□ -1.08
PUF3Q07807 RCF1YML030W 480 nt8.28□□□□□ -1.08 RIP-Chip
PUF3Q07807 SWM1YDR260C 513 nt8.27□□□□□ -1.09
PUF3Q07807 YHP1YDR451C 1062 nt8.27□□□□□ -1.09
PUF3Q07807 GLY1YEL046C 1164 nt8.27□□□□□ -1.09
PUF3Q07807 PUP3YER094C 618 nt8.26□□□□□ -1.09
PUF3Q07807 PUS5YLR165C 765 nt8.26□□□□□ -1.09
PUF3Q07807 YMR007WYMR007W 381 nt8.26□□□□□ -1.09
PUF3Q07807 GNP1YDR508C 1992 nt8.26□□□□□ -1.09
PUF3Q07807 YHL030W-AYHL030W-A 462 nt8.25□□□□□ -1.09
PUF3Q07807 AIR1YIL079C 1083 nt8.25□□□□□ -1.09
PUF3Q07807 NEM1YHR004C 1341 nt8.25□□□□□ -1.09
PUF3Q07807 WSC3YOL105C 1671 nt8.24□□□□□ -1.09
PUF3Q07807 HOS2YGL194C 1359 nt8.24□□□□□ -1.09
PUF3Q07807 YBL081WYBL081W 1107 nt8.24□□□□□ -1.09
PUF3Q07807 RCR1YBR005W 642 nt8.24□□□□□ -1.09
PUF3Q07807 DIA4YHR011W 1341 nt8.24□□□□□ -1.09 RIP-Chip
PUF3Q07807 MRN1YPL184C 1839 nt8.24□□□□□ -1.09
PUF3Q07807 DIP5YPL265W 1827 nt8.24□□□□□ -1.09
PUF3Q07807 YAL016C-BYAL016C-B 186 nt8.23□□□□□ -1.09
PUF3Q07807 ATG17YLR423C 1254 nt8.23□□□□□ -1.09
PUF3Q07807 YMR306C-AYMR306C-A 390 nt8.23□□□□□ -1.09
PUF3Q07807 MRP7YNL005C 1116 nt8.23□□□□□ -1.09 RIP-Chip
PUF3Q07807 KTR3YBR205W 1215 nt8.23□□□□□ -1.09
PUF3Q07807 SHC1YER096W 1539 nt8.23□□□□□ -1.09
PUF3Q07807 MDL2YPL270W 2322 nt8.23□□□□□ -1.09
PUF3Q07807 Q0255Q0255 1419 nt8.21□□□□□ -1.09
PUF3Q07807 YMR206WYMR206W 942 nt8.21□□□□□ -1.1
PUF3Q07807 RTG2YGL252C 1767 nt8.2□□□□□ -1.1
PUF3Q07807 ADE16YLR028C 1776 nt8.2□□□□□ -1.1
PUF3Q07807 FAF1YIL019W 1041 nt8.2□□□□□ -1.1
PUF3Q07807 NAT5YOR253W 531 nt8.2□□□□□ -1.1
PUF3Q07807 YPR084WYPR084W 1371 nt8.2□□□□□ -1.1
PUF3Q07807 HXT8YJL214W 1710 nt8.2□□□□□ -1.1
PUF3Q07807 PET18YCR020C 648 nt8.19□□□□□ -1.1
PUF3Q07807 ARO3YDR035W 1113 nt8.19□□□□□ -1.1
PUF3Q07807 MPC1YGL080W 393 nt8.19□□□□□ -1.1
PUF3Q07807 FHN1YGR131W 525 nt8.19□□□□□ -1.1
PUF3Q07807 YJL160CYJL160C 864 nt8.19□□□□□ -1.1
PUF3Q07807 PRE10YOR362C 867 nt8.19□□□□□ -1.1
PUF3Q07807 STD1YOR047C 1335 nt8.19□□□□□ -1.1
PUF3Q07807 ATP6Q0085 780 nt8.18□□□□□ -1.1
PUF3Q07807 BXI1YNL305C 894 nt8.18□□□□□ -1.1
PUF3Q07807 RPS6AYPL090C 711 nt8.18□□□□□ -1.1
PUF3Q07807 RPS6BYBR181C 711 nt8.18□□□□□ -1.1
PUF3Q07807 KTR4YBR199W 1395 nt8.18□□□□□ -1.1
PUF3Q07807 AIM41YOR215C 558 nt8.17□□□□□ -1.1
PUF3Q07807 BNA3YJL060W 1335 nt8.17□□□□□ -1.1
PUF3Q07807 APM1YPL259C 1428 nt8.17□□□□□ -1.1
PUF3Q07807 WSC4YHL028W 1818 nt8.16□□□□□ -1.1
PUF3Q07807 ICE2YIL090W 1476 nt8.16□□□□□ -1.1
PUF3Q07807 YLR036CYLR036C 612 nt8.16□□□□□ -1.1
PUF3Q07807 DUS3YLR401C 2007 nt8.16□□□□□ -1.1
PUF3Q07807 YML079WYML079W 606 nt8.16□□□□□ -1.1
PUF3Q07807 ALG7YBR243C 1347 nt8.16□□□□□ -1.1
PUF3Q07807 POP2YNR052C 1302 nt8.15□□□□□ -1.1 RIP-Chip
PUF3Q07807 YGL188CYGL188C 174 nt8.15□□□□□ -1.1
PUF3Q07807 SNP1YIL061C 903 nt8.15□□□□□ -1.1
PUF3Q07807 MFT1YML062C 1179 nt8.15□□□□□ -1.1
PUF3Q07807 MRPL36YBR122C 534 nt8.15□□□□□ -1.1 RIP-Chip
PUF3Q07807 TIM50YPL063W 1431 nt8.14□□□□□ -1.11
PUF3Q07807 YER156CYER156C 1017 nt8.14□□□□□ -1.11
PUF3Q07807 PMU1YKL128C 888 nt8.13□□□□□ -1.11
PUF3Q07807 YMR147WYMR147W 672 nt8.13□□□□□ -1.11
PUF3Q07807 JHD1YER051W 1479 nt8.13□□□□□ -1.11
PUF3Q07807 SWP1YMR149W 861 nt8.12□□□□□ -1.11
PUF3Q07807 MDH2YOL126C 1134 nt8.12□□□□□ -1.11
PUF3Q07807 SNU66YOR308C 1764 nt8.12□□□□□ -1.11
PUF3Q07807 MNN9YPL050C 1188 nt8.11□□□□□ -1.11
PUF3Q07807 FIT1YDR534C 1587 nt8.1□□□□□ -1.11
PUF3Q07807 YIA6YIL006W 1122 nt8.1□□□□□ -1.11 RIP-Chip
PUF3Q07807 YNL234WYNL234W 1281 nt8.1□□□□□ -1.11
PUF3Q07807 SCO2YBR024W 906 nt8.1□□□□□ -1.11 RIP-Chip
PUF3Q07807 GCD11YER025W 1584 nt8.1□□□□□ -1.11
PUF3Q07807 MTC6YHR151C 1581 nt8.1□□□□□ -1.11
PUF3Q07807 tR(UCU)Q1tR(UCU)Q1 73 nt8.09□□□□□ -1.11
PUF3Q07807 UBC12YLR306W 567 nt8.09□□□□□ -1.11
PUF3Q07807 ADE2YOR128C 1716 nt8.09□□□□□ -1.11
PUF3Q07807 ATP2YJR121W 1536 nt8.08□□□□□ -1.12
PUF3Q07807 ARG7YMR062C 1326 nt8.08□□□□□ -1.12
PUF3Q07807 RPL2AYFR031C-A 765 nt8.08□□□□□ -1.12
PUF3Q07807 YOR169CYOR169C 465 nt8.08□□□□□ -1.12
PUF3Q07807 PFS2YNL317W 1398 nt8.08□□□□□ -1.12
PUF3Q07807 UTR5YEL035C 501 nt8.07□□□□□ -1.12
PUF3Q07807 UFD1YGR048W 1086 nt8.07□□□□□ -1.12
PUF3Q07807 ALR1YOL130W 2580 nt8.06□□□□□ -1.12
PUF3Q07807 COX16YJL003W 357 nt8.06□□□□□ -1.12
PUF3Q07807 ARC19YKL013C 516 nt8.06□□□□□ -1.12
PUF3Q07807 ELP6YMR312W 822 nt8.06□□□□□ -1.12
PUF3Q07807 GET2YER083C 858 nt8.05□□□□□ -1.12
PUF3Q07807 PEX27YOR193W 1131 nt8.05□□□□□ -1.12
PUF3Q07807 PCL10YGL134W 1302 nt8.04□□□□□ -1.12
PUF3Q07807 HSV2YGR223C 1347 nt8.04□□□□□ -1.12
PUF3Q07807 KDX1YKL161C 1302 nt8.04□□□□□ -1.12 RIP-Chip
PUF3Q07807 SOD2YHR008C 702 nt8.04□□□□□ -1.12
PUF3Q07807 TES1YJR019C 1050 nt8.04□□□□□ -1.12
PUF3Q07807 YIL168WYIL168W 384 nt8.03□□□□□ -1.12
PUF3Q07807 CDA1YLR307W 906 nt8.03□□□□□ -1.12
PUF3Q07807 NAS6YGR232W 687 nt8.02□□□□□ -1.13
PUF3Q07807 RIB1YBL033C 1038 nt8.02□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 62.1 ms