Protein–RNA interactions for Protein: Q05787

HRD3, ERAD-associated E3 ubiquitin-protein ligase component HRD3, yeastyeast

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HRD3Q05787 TIF3YPR163C 1311 nt7.82□□□□□ -1.16
HRD3Q05787 TOK1YJL093C 2076 nt7.82□□□□□ -1.16
HRD3Q05787 YNL140CYNL140C 570 nt7.82□□□□□ -1.16
HRD3Q05787 tD(GUC)BtD(GUC)B 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)DtD(GUC)D 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)G1tD(GUC)G1 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)G2tD(GUC)G2 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)I1tD(GUC)I1 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)I2tD(GUC)I2 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)J1tD(GUC)J1 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)J2tD(GUC)J2 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)J3tD(GUC)J3 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)J4tD(GUC)J4 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)KtD(GUC)K 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)L1tD(GUC)L1 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)L2tD(GUC)L2 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)MtD(GUC)M 72 nt7.81□□□□□ -1.16
HRD3Q05787 tD(GUC)OtD(GUC)O 72 nt7.81□□□□□ -1.16
HRD3Q05787 MNN9YPL050C 1188 nt7.81□□□□□ -1.16
HRD3Q05787 FTH1YBR207W 1398 nt7.81□□□□□ -1.16
HRD3Q05787 YDR510C-AYDR510C-A 117 nt7.8□□□□□ -1.16
HRD3Q05787 DST1YGL043W 930 nt7.8□□□□□ -1.16
HRD3Q05787 CPR2YHR057C 618 nt7.8□□□□□ -1.16
HRD3Q05787 CRN1YLR429W 1956 nt7.79□□□□□ -1.16
HRD3Q05787 STE3YKL178C 1413 nt7.78□□□□□ -1.16
HRD3Q05787 RPR1RPR1 369 nt7.77□□□□□ -1.17
HRD3Q05787 GAL2YLR081W 1725 nt7.77□□□□□ -1.17
HRD3Q05787 RRP43YCR035C 1185 nt7.76□□□□□ -1.17
HRD3Q05787 YML079WYML079W 606 nt7.76□□□□□ -1.17
HRD3Q05787 ELP6YMR312W 822 nt7.76□□□□□ -1.17
HRD3Q05787 ERV2YPR037C 591 nt7.76□□□□□ -1.17
HRD3Q05787 MTC6YHR151C 1581 nt7.76□□□□□ -1.17
HRD3Q05787 TES1YJR019C 1050 nt7.75□□□□□ -1.17
HRD3Q05787 YNL295WYNL295W 1575 nt7.75□□□□□ -1.17
HRD3Q05787 PIH1YHR034C 1035 nt7.74□□□□□ -1.17
HRD3Q05787 MCM5YLR274W 2328 nt7.74□□□□□ -1.17
HRD3Q05787 YIL177CYIL177C 5277 nt7.73□□□□□ -1.17
HRD3Q05787 DOC1YGL240W 753 nt7.73□□□□□ -1.17
HRD3Q05787 PUP2YGR253C 783 nt7.73□□□□□ -1.17
HRD3Q05787 YJR142WYJR142W 1029 nt7.73□□□□□ -1.17
HRD3Q05787 YML034C-AYML034C-A 399 nt7.73□□□□□ -1.17
HRD3Q05787 ORT1YOR130C 879 nt7.73□□□□□ -1.17
HRD3Q05787 KTR4YBR199W 1395 nt7.72□□□□□ -1.17
HRD3Q05787 STS1YIR011C 960 nt7.72□□□□□ -1.17
HRD3Q05787 ATP23YNR020C 813 nt7.72□□□□□ -1.17
HRD3Q05787 MIM1YOL026C 342 nt7.72□□□□□ -1.17
HRD3Q05787 PAB1YER165W 1734 nt7.72□□□□□ -1.17
HRD3Q05787 PSA1YDL055C 1086 nt7.71□□□□□ -1.18
HRD3Q05787 NMA2YGR010W 1188 nt7.71□□□□□ -1.18
HRD3Q05787 INP54YOL065C 1155 nt7.71□□□□□ -1.18
HRD3Q05787 YOR072WYOR072W 315 nt7.71□□□□□ -1.18
HRD3Q05787 AOS1YPR180W 1044 nt7.71□□□□□ -1.18
HRD3Q05787 HBS1YKR084C 1836 nt7.71□□□□□ -1.18
HRD3Q05787 HAM1YJR069C 594 nt7.7□□□□□ -1.18
HRD3Q05787 SPS1YDR523C 1473 nt7.69□□□□□ -1.18
HRD3Q05787 MSI1YBR195C 1269 nt7.69□□□□□ -1.18
HRD3Q05787 YGL081WYGL081W 963 nt7.67□□□□□ -1.18
HRD3Q05787 CDA1YLR307W 906 nt7.67□□□□□ -1.18
HRD3Q05787 ADH6YMR318C 1083 nt7.67□□□□□ -1.18
HRD3Q05787 UME1YPL139C 1383 nt7.67□□□□□ -1.18
HRD3Q05787 RSC4YKR008W 1878 nt7.66□□□□□ -1.18
HRD3Q05787 SLM3YDL033C 1254 nt7.66□□□□□ -1.18
HRD3Q05787 COS10YNR075W 1125 nt7.66□□□□□ -1.18
HRD3Q05787 DUR3YHL016C 2208 nt7.65□□□□□ -1.18
HRD3Q05787 YHR033WYHR033W 1272 nt7.65□□□□□ -1.18
HRD3Q05787 YAL019W-AYAL019W-A 570 nt7.65□□□□□ -1.18
HRD3Q05787 OSM1YJR051W 1506 nt7.65□□□□□ -1.18
HRD3Q05787 TPO1YLL028W 1761 nt7.65□□□□□ -1.18
HRD3Q05787 HRB1YNL004W 1365 nt7.65□□□□□ -1.18
HRD3Q05787 MEX67YPL169C 1800 nt7.65□□□□□ -1.18
HRD3Q05787 CDC3YLR314C 1563 nt7.64□□□□□ -1.19
HRD3Q05787 MAS2YHR024C 1449 nt7.64□□□□□ -1.19
HRD3Q05787 PPZ2YDR436W 2133 nt7.63□□□□□ -1.19
HRD3Q05787 YBL111CYBL111C 2004 nt7.63□□□□□ -1.19
HRD3Q05787 snR4snR4 186 nt7.63□□□□□ -1.19
HRD3Q05787 CKI1YLR133W 1749 nt7.63□□□□□ -1.19
HRD3Q05787 LAT1YNL071W 1449 nt7.62□□□□□ -1.19
HRD3Q05787 YPT10YBR264C 600 nt7.62□□□□□ -1.19
HRD3Q05787 GET2YER083C 858 nt7.61□□□□□ -1.19
HRD3Q05787 ERV25YML012W 636 nt7.61□□□□□ -1.19
HRD3Q05787 YPC1YBR183W 951 nt7.61□□□□□ -1.19
HRD3Q05787 DIA4YHR011W 1341 nt7.6□□□□□ -1.19
HRD3Q05787 CYS3YAL012W 1185 nt7.6□□□□□ -1.19
HRD3Q05787 PRY2YKR013W 990 nt7.6□□□□□ -1.19
HRD3Q05787 PTH2YBL057C 627 nt7.6□□□□□ -1.19
HRD3Q05787 YPQ1YOL092W 927 nt7.6□□□□□ -1.19
HRD3Q05787 DSC3YOR223W 879 nt7.6□□□□□ -1.19
HRD3Q05787 RPL2AYFR031C-A 765 nt7.59□□□□□ -1.19
HRD3Q05787 DAL80YKR034W 810 nt7.59□□□□□ -1.19
HRD3Q05787 FRA1YLL029W 2250 nt7.59□□□□□ -1.19
HRD3Q05787 SKP1YDR328C 585 nt7.58□□□□□ -1.2
HRD3Q05787 YOX1YML027W 1158 nt7.58□□□□□ -1.2
HRD3Q05787 YPL067CYPL067C 597 nt7.58□□□□□ -1.2
HRD3Q05787 PMT1YDL095W 2454 nt7.58□□□□□ -1.2
HRD3Q05787 AVL9YLR114C 2295 nt7.58□□□□□ -1.2
HRD3Q05787 YDR215CYDR215C 414 nt7.57□□□□□ -1.2
HRD3Q05787 PIL1YGR086C 1020 nt7.57□□□□□ -1.2
HRD3Q05787 MBF1YOR298C-A 456 nt7.57□□□□□ -1.2
HRD3Q05787 PEX28YHR150W 1740 nt7.57□□□□□ -1.2
HRD3Q05787 MDL2YPL270W 2322 nt7.57□□□□□ -1.2
Retrieved 100 of 7,029 protein–RNA pairs in 9.7 ms