Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TNRC18O15417 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.8■■■□□ 2.2
TNRC18O15417 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
TNRC18O15417 RALB-208ENST00000631312 311 ntTSL 5 BASIC28.8■■■□□ 2.2
TNRC18O15417 DUX4L9-201ENST00000449051 1259 ntBASIC28.79■■■□□ 2.2
TNRC18O15417 AL592293.1-201ENST00000502889 1188 ntBASIC28.79■■■□□ 2.2
TNRC18O15417 AC103834.1-201ENST00000520383 144 ntBASIC28.79■■■□□ 2.2
TNRC18O15417 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.79■■■□□ 2.2
TNRC18O15417 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.79■■■□□ 2.2
TNRC18O15417 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
TNRC18O15417 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.78■■■□□ 2.2
TNRC18O15417 AC010980.1-201ENST00000587192 1142 ntBASIC28.78■■■□□ 2.2
TNRC18O15417 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC28.77■■■□□ 2.2
TNRC18O15417 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
TNRC18O15417 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.77■■■□□ 2.2
TNRC18O15417 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.76■■■□□ 2.2
TNRC18O15417 AC148477.6-201ENST00000623746 465 ntBASIC28.76■■■□□ 2.19
TNRC18O15417 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TNRC18O15417 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC28.75■■■□□ 2.19
TNRC18O15417 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TNRC18O15417 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.75■■■□□ 2.19
TNRC18O15417 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
TNRC18O15417 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
TNRC18O15417 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
TNRC18O15417 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
TNRC18O15417 AC007029.1-201ENST00000604183 313 ntBASIC28.73■■■□□ 2.19
TNRC18O15417 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.72■■■□□ 2.19
TNRC18O15417 ECEL1P2-201ENST00000461596 1295 ntBASIC28.72■■■□□ 2.19
TNRC18O15417 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.72■■■□□ 2.19
TNRC18O15417 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
TNRC18O15417 AC009831.1-201ENST00000580420 1582 ntBASIC28.72■■■□□ 2.19
TNRC18O15417 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.72■■■□□ 2.19
TNRC18O15417 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
TNRC18O15417 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.72■■■□□ 2.19
TNRC18O15417 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.7■■■□□ 2.19
TNRC18O15417 AC103724.3-201ENST00000564481 992 ntBASIC28.7■■■□□ 2.19
TNRC18O15417 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
TNRC18O15417 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC28.7■■■□□ 2.18
TNRC18O15417 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
TNRC18O15417 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
TNRC18O15417 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.68■■■□□ 2.18
TNRC18O15417 AL157400.5-201ENST00000507624 621 ntBASIC28.68■■■□□ 2.18
TNRC18O15417 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.67■■■□□ 2.18
TNRC18O15417 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
TNRC18O15417 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
TNRC18O15417 AC133552.2-201ENST00000619106 1032 ntBASIC28.67■■■□□ 2.18
TNRC18O15417 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TNRC18O15417 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC28.66■■■□□ 2.18
TNRC18O15417 BHLHE23-202ENST00000612929 1109 ntBASIC28.66■■■□□ 2.18
TNRC18O15417 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
TNRC18O15417 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC28.65■■■□□ 2.18
TNRC18O15417 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
TNRC18O15417 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
TNRC18O15417 MIR6765-201ENST00000614092 87 ntBASIC28.64■■■□□ 2.18
TNRC18O15417 YBX1P4-201ENST00000392794 808 ntBASIC28.64■■■□□ 2.17
TNRC18O15417 MOB2-207ENST00000614710 705 ntTSL 5 BASIC28.64■■■□□ 2.17
TNRC18O15417 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
TNRC18O15417 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.63■■■□□ 2.17
TNRC18O15417 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TNRC18O15417 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
TNRC18O15417 RARRES2P6-201ENST00000567333 442 ntBASIC28.62■■■□□ 2.17
TNRC18O15417 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
TNRC18O15417 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC28.62■■■□□ 2.17
TNRC18O15417 PRTG-204ENST00000561292 833 ntTSL 3 BASIC28.62■■■□□ 2.17
TNRC18O15417 MIR4508-201ENST00000584178 70 ntBASIC28.62■■■□□ 2.17
TNRC18O15417 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
TNRC18O15417 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
TNRC18O15417 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC28.61■■■□□ 2.17
TNRC18O15417 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TNRC18O15417 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
TNRC18O15417 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.61■■■□□ 2.17
TNRC18O15417 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.61■■■□□ 2.17
TNRC18O15417 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.6■■■□□ 2.17
TNRC18O15417 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC28.6■■■□□ 2.17
TNRC18O15417 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
TNRC18O15417 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.6■■■□□ 2.17
TNRC18O15417 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.59■■■□□ 2.17
TNRC18O15417 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC28.58■■■□□ 2.17
TNRC18O15417 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TNRC18O15417 MIR219A2-201ENST00000608502 1504 ntBASIC28.58■■■□□ 2.17
TNRC18O15417 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TNRC18O15417 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC28.58■■■□□ 2.17
TNRC18O15417 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TNRC18O15417 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC28.57■■■□□ 2.16
TNRC18O15417 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.57■■■□□ 2.16
TNRC18O15417 AC239859.2-201ENST00000444165 318 ntBASIC28.56■■■□□ 2.16
TNRC18O15417 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TNRC18O15417 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
TNRC18O15417 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.56■■■□□ 2.16
TNRC18O15417 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TNRC18O15417 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC28.54■■■□□ 2.16
TNRC18O15417 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
TNRC18O15417 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
TNRC18O15417 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.54■■■□□ 2.16
TNRC18O15417 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
TNRC18O15417 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC28.53■■■□□ 2.16
TNRC18O15417 AL139246.5-201ENST00000606645 996 ntBASIC28.53■■■□□ 2.16
TNRC18O15417 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.53■■■□□ 2.16
TNRC18O15417 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.53■■■□□ 2.16
TNRC18O15417 PVT1_1.1-201ENST00000615125 194 ntBASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms