Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NFKB1P19838 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NFKB1P19838 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NFKB1P19838 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.35□□□□□ -1.55
NFKB1P19838 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NFKB1P19838 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NFKB1P19838 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NFKB1P19838 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NFKB1P19838 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NFKB1P19838 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NFKB1P19838 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.34□□□□□ -1.55
NFKB1P19838 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NFKB1P19838 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NFKB1P19838 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NFKB1P19838 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NFKB1P19838 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
NFKB1P19838 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.34□□□□□ -1.55
NFKB1P19838 U3.7-201ENST00000363668 216 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NFKB1P19838 Y_RNA.551-201ENST00000384661 102 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
NFKB1P19838 ENSAP1-201ENST00000392855 326 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 AL138885.1-201ENST00000405921 675 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 OR3A2-201ENST00000408891 1076 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.34□□□□□ -1.55
NFKB1P19838 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.34□□□□□ -1.55
NFKB1P19838 RPS23P10-201ENST00000416185 486 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 RPS15AP40-201ENST00000419621 391 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 CHEK2P5-201ENST00000423877 246 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 AC139712.2-201ENST00000424302 339 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 CEACAMP1-201ENST00000434624 1035 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 AC008264.1-201ENST00000447612 367 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 snoU109.4-201ENST00000458953 143 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 RNU7-138P-201ENST00000459479 64 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 RN7SL189P-201ENST00000468631 289 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.34□□□□□ -1.55
NFKB1P19838 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.34□□□□□ -1.55
NFKB1P19838 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.34□□□□□ -1.55
NFKB1P19838 SNORA25.11-201ENST00000515935 105 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 Y_RNA.689-201ENST00000516589 107 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 AP000859.1-201ENST00000525536 307 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.34□□□□□ -1.55
NFKB1P19838 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.34□□□□□ -1.55
NFKB1P19838 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.34□□□□□ -1.55
NFKB1P19838 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.34□□□□□ -1.55
NFKB1P19838 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.34□□□□□ -1.55
NFKB1P19838 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.34□□□□□ -1.55
NFKB1P19838 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.34□□□□□ -1.55
NFKB1P19838 AC006363.1-201ENST00000603806 463 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 ELOCP5-201ENST00000604924 333 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 RAC1P9-201ENST00000604990 392 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 AC006329.2-201ENST00000611491 394 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NFKB1P19838 AL049767.1-202ENST00000637826 242 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 AC074101.1-201ENST00000637861 241 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.34□□□□□ -1.55
NFKB1P19838 DDX10P1-201ENST00000448545 1933 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
NFKB1P19838 AC092747.4-201ENST00000620519 1861 ntBASIC5.34□□□□□ -1.55
NFKB1P19838 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
NFKB1P19838 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.34□□□□□ -1.56
NFKB1P19838 AC112198.2-201ENST00000426589 6996 ntBASIC5.34□□□□□ -1.56
NFKB1P19838 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.34□□□□□ -1.56
NFKB1P19838 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
NFKB1P19838 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NFKB1P19838 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NFKB1P19838 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
NFKB1P19838 AC138393.1-203ENST00000327086 343 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 RNU6-249P-201ENST00000363016 102 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 Y_RNA.151-201ENST00000363566 112 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 RNU6-339P-201ENST00000384310 107 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 Y_RNA.478-201ENST00000384358 107 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 Y_RNA.555-201ENST00000384673 110 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 MIR143-201ENST00000385300 106 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 RNU6-1093P-201ENST00000391194 107 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 AC110754.1-201ENST00000399740 601 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 SYF2P2-201ENST00000417620 583 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 RPL30P3-201ENST00000424262 333 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 RPL7L1P9-201ENST00000431298 745 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 MTND5P15-201ENST00000434246 349 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.33□□□□□ -1.56
NFKB1P19838 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.33□□□□□ -1.56
NFKB1P19838 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.33□□□□□ -1.56
NFKB1P19838 AC006427.1-201ENST00000514359 712 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 RNA5SP230-201ENST00000517039 122 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 CDH12P4-201ENST00000517835 295 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 CDH12P3-201ENST00000517935 295 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 CDH12P1-201ENST00000518435 295 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.33□□□□□ -1.56
NFKB1P19838 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.33□□□□□ -1.56
NFKB1P19838 CR383656.7-201ENST00000548164 174 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.33□□□□□ -1.56
NFKB1P19838 AC022884.2-201ENST00000578535 580 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 AC110743.1-201ENST00000584870 478 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 AC093227.2-201ENST00000589357 285 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.33□□□□□ -1.56
NFKB1P19838 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.33□□□□□ -1.56
NFKB1P19838 AC002044.1-201ENST00000606707 158 ntBASIC5.33□□□□□ -1.56
NFKB1P19838 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 160.2 ms