Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.42□□□□□ -0.26
VPS25Q9BRG1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS25Q9BRG1 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS25Q9BRG1 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS25Q9BRG1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
VPS25Q9BRG1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
VPS25Q9BRG1 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
VPS25Q9BRG1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
VPS25Q9BRG1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 HES6-205ENST00000409356 528 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS25Q9BRG1 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS25Q9BRG1 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 KRT18P10-201ENST00000388836 1287 ntBASIC13.39□□□□□ -0.27
VPS25Q9BRG1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VPS25Q9BRG1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms