Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 PRORSD1P-201ENST00000295112 541 ntBASIC18.52■□□□□ 0.56
KRT78Q8N1N4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 AC142381.4-202ENST00000563973 229 ntBASIC18.52■□□□□ 0.56
KRT78Q8N1N4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
KRT78Q8N1N4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.52■□□□□ 0.55
KRT78Q8N1N4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT78Q8N1N4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
KRT78Q8N1N4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT78Q8N1N4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT78Q8N1N4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT78Q8N1N4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT78Q8N1N4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
KRT78Q8N1N4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 AC141586.3-201ENST00000562166 1838 ntBASIC18.51■□□□□ 0.55
KRT78Q8N1N4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.51■□□□□ 0.55
KRT78Q8N1N4 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 NIFKP9-201ENST00000419265 221 ntBASIC18.5■□□□□ 0.55
KRT78Q8N1N4 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 RARRES2P10-201ENST00000564312 460 ntBASIC18.5■□□□□ 0.55
KRT78Q8N1N4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 AL353708.3-201ENST00000610272 989 ntBASIC18.5■□□□□ 0.55
KRT78Q8N1N4 AL445675.2-201ENST00000620291 557 ntBASIC18.5■□□□□ 0.55
KRT78Q8N1N4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 LINC01465-201ENST00000408887 1940 ntBASIC18.5■□□□□ 0.55
KRT78Q8N1N4 TEX21P-204ENST00000641479 1693 ntBASIC18.5■□□□□ 0.55
KRT78Q8N1N4 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
KRT78Q8N1N4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.49■□□□□ 0.55
KRT78Q8N1N4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.49■□□□□ 0.55
KRT78Q8N1N4 AC131212.4-201ENST00000623606 975 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms