Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MIR4674-201ENST00000582457 87 ntBASIC21.08■□□□□ 0.96
COL1A2P08123 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.08■□□□□ 0.96
COL1A2P08123 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL1A2P08123 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.07■□□□□ 0.96
COL1A2P08123 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A2P08123 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A2P08123 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
COL1A2P08123 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.07■□□□□ 0.96
COL1A2P08123 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A2P08123 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A2P08123 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
COL1A2P08123 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A2P08123 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.07■□□□□ 0.96
COL1A2P08123 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.07■□□□□ 0.96
COL1A2P08123 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.07■□□□□ 0.96
COL1A2P08123 AC008622.2-201ENST00000617006 1229 ntBASIC21.07■□□□□ 0.96
COL1A2P08123 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A2P08123 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A2P08123 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A2P08123 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
COL1A2P08123 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
COL1A2P08123 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A2P08123 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A2P08123 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A2P08123 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A2P08123 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A2P08123 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A2P08123 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.06■□□□□ 0.96
COL1A2P08123 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.06■□□□□ 0.96
COL1A2P08123 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.06■□□□□ 0.96
COL1A2P08123 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A2P08123 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
COL1A2P08123 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.06■□□□□ 0.96
COL1A2P08123 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A2P08123 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.06■□□□□ 0.96
COL1A2P08123 HOMER2P1-201ENST00000455653 964 ntBASIC21.06■□□□□ 0.96
COL1A2P08123 AC092647.4-201ENST00000457211 535 ntBASIC21.06■□□□□ 0.96
COL1A2P08123 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.06■□□□□ 0.96
COL1A2P08123 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A2P08123 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.06■□□□□ 0.96
COL1A2P08123 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
COL1A2P08123 AL023973.1-201ENST00000624619 620 ntBASIC21.06■□□□□ 0.96
COL1A2P08123 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.06■□□□□ 0.96
COL1A2P08123 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
COL1A2P08123 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
COL1A2P08123 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A2P08123 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A2P08123 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
COL1A2P08123 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.05■□□□□ 0.96
COL1A2P08123 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.05■□□□□ 0.96
COL1A2P08123 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.05■□□□□ 0.96
COL1A2P08123 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.05■□□□□ 0.96
COL1A2P08123 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A2P08123 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.05■□□□□ 0.96
COL1A2P08123 AC009947.2-201ENST00000444014 672 ntBASIC21.05■□□□□ 0.96
COL1A2P08123 AL441883.1-201ENST00000566170 1045 ntBASIC21.05■□□□□ 0.96
COL1A2P08123 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.05■□□□□ 0.96
COL1A2P08123 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL1A2P08123 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.05■□□□□ 0.96
COL1A2P08123 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.05■□□□□ 0.96
COL1A2P08123 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC21.05■□□□□ 0.96
COL1A2P08123 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A2P08123 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.05■□□□□ 0.96
COL1A2P08123 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
COL1A2P08123 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.05■□□□□ 0.96
COL1A2P08123 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A2P08123 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A2P08123 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A2P08123 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A2P08123 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
COL1A2P08123 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
COL1A2P08123 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.05■□□□□ 0.96
COL1A2P08123 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
COL1A2P08123 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
COL1A2P08123 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 AC125437.2-201ENST00000625180 2167 ntBASIC21.04■□□□□ 0.96
COL1A2P08123 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.04■□□□□ 0.96
COL1A2P08123 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.04■□□□□ 0.96
COL1A2P08123 Z82202.1-201ENST00000623446 1880 ntBASIC21.04■□□□□ 0.96
COL1A2P08123 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
COL1A2P08123 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
COL1A2P08123 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.04■□□□□ 0.96
COL1A2P08123 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
COL1A2P08123 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.04■□□□□ 0.96
COL1A2P08123 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.04■□□□□ 0.96
COL1A2P08123 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.04■□□□□ 0.96
COL1A2P08123 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.04■□□□□ 0.96
COL1A2P08123 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.04■□□□□ 0.96
COL1A2P08123 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.04■□□□□ 0.96
COL1A2P08123 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
COL1A2P08123 AC140113.3-201ENST00000605663 199 ntBASIC21.04■□□□□ 0.96
COL1A2P08123 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms