Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.12■□□□□ 0.97
COL1A2P08123 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL1A2P08123 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A2P08123 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A2P08123 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.11■□□□□ 0.97
COL1A2P08123 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A2P08123 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.11■□□□□ 0.97
COL1A2P08123 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A2P08123 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.11■□□□□ 0.97
COL1A2P08123 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
COL1A2P08123 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.11■□□□□ 0.97
COL1A2P08123 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A2P08123 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
COL1A2P08123 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A2P08123 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A2P08123 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
COL1A2P08123 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
COL1A2P08123 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.11■□□□□ 0.97
COL1A2P08123 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A2P08123 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A2P08123 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.11■□□□□ 0.97
COL1A2P08123 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL1A2P08123 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
COL1A2P08123 AP000523.1-201ENST00000398242 1049 ntBASIC21.1■□□□□ 0.97
COL1A2P08123 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.1■□□□□ 0.97
COL1A2P08123 TSPY5P-201ENST00000426936 936 ntBASIC21.1■□□□□ 0.97
COL1A2P08123 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.1■□□□□ 0.97
COL1A2P08123 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.1■□□□□ 0.97
COL1A2P08123 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.1■□□□□ 0.97
COL1A2P08123 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
COL1A2P08123 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
COL1A2P08123 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.1■□□□□ 0.97
COL1A2P08123 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.1■□□□□ 0.97
COL1A2P08123 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
COL1A2P08123 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
COL1A2P08123 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.1■□□□□ 0.97
COL1A2P08123 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.1■□□□□ 0.97
COL1A2P08123 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.1■□□□□ 0.97
COL1A2P08123 NEK4P2-201ENST00000580004 1012 ntBASIC21.1■□□□□ 0.97
COL1A2P08123 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL1A2P08123 MYC-208ENST00000641036 567 ntBASIC21.1■□□□□ 0.97
COL1A2P08123 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
COL1A2P08123 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.09■□□□□ 0.97
COL1A2P08123 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
COL1A2P08123 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.09■□□□□ 0.97
COL1A2P08123 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL1A2P08123 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.09■□□□□ 0.97
COL1A2P08123 AC087388.1-201ENST00000571370 1112 ntBASIC21.09■□□□□ 0.97
COL1A2P08123 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.09■□□□□ 0.97
COL1A2P08123 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
COL1A2P08123 AC011558.1-201ENST00000623459 338 ntBASIC21.09■□□□□ 0.97
COL1A2P08123 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL1A2P08123 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL1A2P08123 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.08■□□□□ 0.97
COL1A2P08123 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.08■□□□□ 0.97
COL1A2P08123 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL1A2P08123 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.08■□□□□ 0.97
COL1A2P08123 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
COL1A2P08123 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
COL1A2P08123 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL1A2P08123 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL1A2P08123 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.08■□□□□ 0.96
COL1A2P08123 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.08■□□□□ 0.96
COL1A2P08123 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL1A2P08123 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
COL1A2P08123 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL1A2P08123 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.08■□□□□ 0.96
COL1A2P08123 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.08■□□□□ 0.96
COL1A2P08123 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.08■□□□□ 0.96
COL1A2P08123 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.08■□□□□ 0.96
COL1A2P08123 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.08■□□□□ 0.96
COL1A2P08123 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms