Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SFTPBP07988 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.72■□□□□ 0.27
SFTPBP07988 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SFTPBP07988 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.72■□□□□ 0.27
SFTPBP07988 POU5F1P3-201ENST00000428824 1078 ntBASIC16.72■□□□□ 0.27
SFTPBP07988 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.72■□□□□ 0.27
SFTPBP07988 TMEM191A-211ENST00000637163 1067 ntBASIC16.72■□□□□ 0.27
SFTPBP07988 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SFTPBP07988 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 PKD1P1-201ENST00000458669 6805 ntBASIC16.72■□□□□ 0.27
SFTPBP07988 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SFTPBP07988 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.71■□□□□ 0.27
SFTPBP07988 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.71■□□□□ 0.27
SFTPBP07988 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.71■□□□□ 0.27
SFTPBP07988 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.71■□□□□ 0.27
SFTPBP07988 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.71■□□□□ 0.27
SFTPBP07988 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.71■□□□□ 0.27
SFTPBP07988 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.71■□□□□ 0.27
SFTPBP07988 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.71■□□□□ 0.27
SFTPBP07988 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.71■□□□□ 0.27
SFTPBP07988 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
SFTPBP07988 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SFTPBP07988 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.71■□□□□ 0.27
SFTPBP07988 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.71■□□□□ 0.27
SFTPBP07988 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SFTPBP07988 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.71■□□□□ 0.27
SFTPBP07988 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.71■□□□□ 0.27
SFTPBP07988 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SFTPBP07988 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SFTPBP07988 Z82202.1-201ENST00000623446 1880 ntBASIC16.71■□□□□ 0.27
SFTPBP07988 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SFTPBP07988 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.7■□□□□ 0.26
SFTPBP07988 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
SFTPBP07988 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SFTPBP07988 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SFTPBP07988 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SFTPBP07988 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
SFTPBP07988 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SFTPBP07988 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SFTPBP07988 AC018553.1-201ENST00000616682 1458 ntBASIC16.7■□□□□ 0.26
SFTPBP07988 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.7■□□□□ 0.26
SFTPBP07988 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SFTPBP07988 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.7■□□□□ 0.26
SFTPBP07988 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SFTPBP07988 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.7■□□□□ 0.26
SFTPBP07988 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.7■□□□□ 0.26
SFTPBP07988 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.7■□□□□ 0.26
SFTPBP07988 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SFTPBP07988 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SFTPBP07988 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.7■□□□□ 0.26
SFTPBP07988 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SFTPBP07988 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.69■□□□□ 0.26
SFTPBP07988 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SFTPBP07988 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SFTPBP07988 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.69■□□□□ 0.26
SFTPBP07988 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms