Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 UNC93B5-201ENST00000530315 699 ntBASIC20.1■□□□□ 0.81
RFX6Q8HWS3 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.1■□□□□ 0.81
RFX6Q8HWS3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 TNXA-203ENST00000507684 2038 ntBASIC20.09■□□□□ 0.81
RFX6Q8HWS3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 POM121L13P-201ENST00000422362 380 ntBASIC20.09■□□□□ 0.81
RFX6Q8HWS3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 TUBB8P6-201ENST00000436895 1288 ntBASIC20.09■□□□□ 0.81
RFX6Q8HWS3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 KRT18P16-201ENST00000510337 1294 ntBASIC20.09■□□□□ 0.81
RFX6Q8HWS3 RNA5SP413-201ENST00000516373 109 ntBASIC20.09■□□□□ 0.81
RFX6Q8HWS3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 LINC01465-201ENST00000408887 1940 ntBASIC20.09■□□□□ 0.81
RFX6Q8HWS3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 TEX21P-204ENST00000641479 1693 ntBASIC20.09■□□□□ 0.81
RFX6Q8HWS3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.09■□□□□ 0.81
RFX6Q8HWS3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.08■□□□□ 0.81
RFX6Q8HWS3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFX6Q8HWS3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX6Q8HWS3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
RFX6Q8HWS3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.08■□□□□ 0.8
RFX6Q8HWS3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX6Q8HWS3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RFX6Q8HWS3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.08■□□□□ 0.8
RFX6Q8HWS3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
RFX6Q8HWS3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX6Q8HWS3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFX6Q8HWS3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms