Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 OR5BN1P-201ENST00000532955 829 ntBASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 AC015818.6-201ENST00000584274 634 ntBASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 AC005514.1-201ENST00000623521 208 ntBASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.85□□□□□ -1.31
PCDHB9Q9Y5E1 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 TRIM51GP-201ENST00000534741 1350 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC005261.2-201ENST00000593427 4258 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC093278.2-201ENST00000564956 2485 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC011155.1-201ENST00000316512 456 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 RNA5SP65-201ENST00000363166 119 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 RNU6-729P-201ENST00000384399 107 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 RNY4P36-201ENST00000391116 96 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 RNA5SP474-201ENST00000391234 90 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC008171.1-201ENST00000395058 200 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC234781.4-201ENST00000419384 244 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 RPS15AP12-201ENST00000419498 388 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 HMGB1P4-201ENST00000455362 567 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AL590639.1-201ENST00000456484 337 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 RNU7-152P-201ENST00000458982 64 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 RNU4-29P-201ENST00000515943 174 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 SOD1P3-201ENST00000518682 454 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC115085.1-201ENST00000588924 229 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 VN1R107P-201ENST00000601784 209 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC012368.3-201ENST00000604190 219 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC091768.1-201ENST00000609258 930 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC130324.3-201ENST00000614165 542 ntBASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.84□□□□□ -1.31
PCDHB9Q9Y5E1 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
PCDHB9Q9Y5E1 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.32
PCDHB9Q9Y5E1 HSPA8P18-201ENST00000439846 1928 ntBASIC6.84□□□□□ -1.32
PCDHB9Q9Y5E1 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 AC122713.2-201ENST00000624942 3335 ntBASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 AL021877.2-201ENST00000624442 10684 ntBASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 VPS35P1-201ENST00000563400 1518 ntBASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 SNORD35A-201ENST00000363389 86 ntBASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 RN7SKP237-201ENST00000364663 301 ntBASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 RNU4-26P-201ENST00000410270 107 ntBASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 EIF5AP4-201ENST00000441206 465 ntBASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDHB9Q9Y5E1 AC144530.1-201ENST00000452862 555 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 175 ms