Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
BEST4Q8NFU0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 AC068880.1-201ENST00000507289 2297 ntBASIC16.74■□□□□ 0.27
BEST4Q8NFU0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
BEST4Q8NFU0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
BEST4Q8NFU0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 AC087633.2-202ENST00000565166 1439 ntBASIC16.72■□□□□ 0.27
BEST4Q8NFU0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
BEST4Q8NFU0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms