Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SFTPBP07988 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SFTPBP07988 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SFTPBP07988 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.84■□□□□ 0.29
SFTPBP07988 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
SFTPBP07988 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SFTPBP07988 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 ABHD17AP1-201ENST00000358206 933 ntBASIC16.84■□□□□ 0.29
SFTPBP07988 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
SFTPBP07988 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC16.84■□□□□ 0.29
SFTPBP07988 HLA-G-202ENST00000376815 851 ntBASIC16.84■□□□□ 0.29
SFTPBP07988 HLA-G-203ENST00000376818 1127 ntBASIC16.84■□□□□ 0.29
SFTPBP07988 TSPY20P-201ENST00000450910 630 ntBASIC16.84■□□□□ 0.29
SFTPBP07988 AC097658.1-201ENST00000475555 843 ntBASIC16.84■□□□□ 0.29
SFTPBP07988 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 AC091874.3-201ENST00000512672 1195 ntBASIC16.84■□□□□ 0.29
SFTPBP07988 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.84■□□□□ 0.29
SFTPBP07988 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.84■□□□□ 0.29
SFTPBP07988 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.84■□□□□ 0.29
SFTPBP07988 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.84■□□□□ 0.29
SFTPBP07988 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SFTPBP07988 MYC-209ENST00000641252 345 ntBASIC16.84■□□□□ 0.29
SFTPBP07988 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
SFTPBP07988 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.84■□□□□ 0.29
SFTPBP07988 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.84■□□□□ 0.29
SFTPBP07988 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.84■□□□□ 0.29
SFTPBP07988 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.84■□□□□ 0.29
SFTPBP07988 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.84■□□□□ 0.29
SFTPBP07988 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.84■□□□□ 0.29
SFTPBP07988 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.84■□□□□ 0.29
SFTPBP07988 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SFTPBP07988 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SFTPBP07988 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.84■□□□□ 0.29
SFTPBP07988 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SFTPBP07988 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SFTPBP07988 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SFTPBP07988 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SFTPBP07988 TNXA-203ENST00000507684 2038 ntBASIC16.83■□□□□ 0.28
SFTPBP07988 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.83■□□□□ 0.28
SFTPBP07988 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.83■□□□□ 0.28
SFTPBP07988 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.83■□□□□ 0.28
SFTPBP07988 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SFTPBP07988 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SFTPBP07988 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.82■□□□□ 0.28
SFTPBP07988 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.82■□□□□ 0.28
SFTPBP07988 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.82■□□□□ 0.28
SFTPBP07988 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.82■□□□□ 0.28
SFTPBP07988 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.82■□□□□ 0.28
SFTPBP07988 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.82■□□□□ 0.28
SFTPBP07988 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.82■□□□□ 0.28
SFTPBP07988 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.82■□□□□ 0.28
SFTPBP07988 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SFTPBP07988 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SFTPBP07988 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms