Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SFTPBP07988 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SFTPBP07988 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.87■□□□□ 0.29
SFTPBP07988 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.87■□□□□ 0.29
SFTPBP07988 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.87■□□□□ 0.29
SFTPBP07988 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.87■□□□□ 0.29
SFTPBP07988 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.87■□□□□ 0.29
SFTPBP07988 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.87■□□□□ 0.29
SFTPBP07988 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SFTPBP07988 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.87■□□□□ 0.29
SFTPBP07988 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.87■□□□□ 0.29
SFTPBP07988 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.87■□□□□ 0.29
SFTPBP07988 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.87■□□□□ 0.29
SFTPBP07988 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.87■□□□□ 0.29
SFTPBP07988 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SFTPBP07988 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.87■□□□□ 0.29
SFTPBP07988 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.87■□□□□ 0.29
SFTPBP07988 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SFTPBP07988 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 AC004408.2-201ENST00000623613 2777 ntBASIC16.87■□□□□ 0.29
SFTPBP07988 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SFTPBP07988 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SFTPBP07988 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.86■□□□□ 0.29
SFTPBP07988 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.86■□□□□ 0.29
SFTPBP07988 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.86■□□□□ 0.29
SFTPBP07988 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SFTPBP07988 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.86■□□□□ 0.29
SFTPBP07988 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.86■□□□□ 0.29
SFTPBP07988 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.86■□□□□ 0.29
SFTPBP07988 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
SFTPBP07988 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.86■□□□□ 0.29
SFTPBP07988 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.86■□□□□ 0.29
SFTPBP07988 RNA5SP413-201ENST00000516373 109 ntBASIC16.86■□□□□ 0.29
SFTPBP07988 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.86■□□□□ 0.29
SFTPBP07988 C2orf69P4-201ENST00000565394 541 ntBASIC16.86■□□□□ 0.29
SFTPBP07988 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.86■□□□□ 0.29
SFTPBP07988 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.86■□□□□ 0.29
SFTPBP07988 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.86■□□□□ 0.29
SFTPBP07988 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.86■□□□□ 0.29
SFTPBP07988 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SFTPBP07988 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SFTPBP07988 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.86■□□□□ 0.29
SFTPBP07988 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.86■□□□□ 0.29
SFTPBP07988 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SFTPBP07988 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.85■□□□□ 0.29
SFTPBP07988 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SFTPBP07988 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SFTPBP07988 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SFTPBP07988 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SFTPBP07988 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SFTPBP07988 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SFTPBP07988 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.85■□□□□ 0.29
SFTPBP07988 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.85■□□□□ 0.29
SFTPBP07988 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.85■□□□□ 0.29
SFTPBP07988 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.85■□□□□ 0.29
SFTPBP07988 MIR4651-201ENST00000582622 73 ntBASIC16.85■□□□□ 0.29
SFTPBP07988 AC083880.1-201ENST00000608266 535 ntBASIC16.85■□□□□ 0.29
SFTPBP07988 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.85■□□□□ 0.29
SFTPBP07988 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SFTPBP07988 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SFTPBP07988 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SFTPBP07988 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SFTPBP07988 AC093484.2-201ENST00000580996 2166 ntBASIC16.85■□□□□ 0.29
SFTPBP07988 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms