Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RFX6Q8HWS3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 AC018445.3-201ENST00000624177 1945 ntBASIC20.25■□□□□ 0.83
RFX6Q8HWS3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.25■□□□□ 0.83
RFX6Q8HWS3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 SOX15-203ENST00000570788 1093 ntBASIC20.25■□□□□ 0.83
RFX6Q8HWS3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RFX6Q8HWS3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 AL121906.2-201ENST00000621597 723 ntBASIC20.24■□□□□ 0.83
RFX6Q8HWS3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFX6Q8HWS3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 AL355802.2-201ENST00000402069 882 ntBASIC20.23■□□□□ 0.83
RFX6Q8HWS3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.23■□□□□ 0.83
RFX6Q8HWS3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms