Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PTCHD4Q6ZW05 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
PTCHD4Q6ZW05 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.4■■□□□ 1.34
PTCHD4Q6ZW05 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
PTCHD4Q6ZW05 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.4■■□□□ 1.34
PTCHD4Q6ZW05 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PTCHD4Q6ZW05 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
PTCHD4Q6ZW05 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTCHD4Q6ZW05 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PTCHD4Q6ZW05 DENR-202ENST00000455982 1052 ntTSL 5 BASIC23.38■■□□□ 1.33
PTCHD4Q6ZW05 AC097358.2-201ENST00000607541 1159 ntBASIC23.38■■□□□ 1.33
PTCHD4Q6ZW05 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCHD4Q6ZW05 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
PTCHD4Q6ZW05 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PTCHD4Q6ZW05 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
PTCHD4Q6ZW05 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCHD4Q6ZW05 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCHD4Q6ZW05 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PTCHD4Q6ZW05 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCHD4Q6ZW05 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCHD4Q6ZW05 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.36■■□□□ 1.33
PTCHD4Q6ZW05 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
PTCHD4Q6ZW05 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.36■■□□□ 1.33
PTCHD4Q6ZW05 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PTCHD4Q6ZW05 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCHD4Q6ZW05 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
PTCHD4Q6ZW05 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.35■■□□□ 1.33
PTCHD4Q6ZW05 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PTCHD4Q6ZW05 AP004833.2-201ENST00000532228 1454 ntBASIC23.35■■□□□ 1.33
PTCHD4Q6ZW05 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PTCHD4Q6ZW05 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.34■■□□□ 1.33
PTCHD4Q6ZW05 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PTCHD4Q6ZW05 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PTCHD4Q6ZW05 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTCHD4Q6ZW05 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTCHD4Q6ZW05 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTCHD4Q6ZW05 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
PTCHD4Q6ZW05 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PTCHD4Q6ZW05 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PTCHD4Q6ZW05 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.33■■□□□ 1.33
PTCHD4Q6ZW05 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.33■■□□□ 1.33
PTCHD4Q6ZW05 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PTCHD4Q6ZW05 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PTCHD4Q6ZW05 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCHD4Q6ZW05 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PTCHD4Q6ZW05 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.32■■□□□ 1.32
PTCHD4Q6ZW05 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PTCHD4Q6ZW05 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.32■■□□□ 1.32
PTCHD4Q6ZW05 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PTCHD4Q6ZW05 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PTCHD4Q6ZW05 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PTCHD4Q6ZW05 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.3■■□□□ 1.32
PTCHD4Q6ZW05 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PTCHD4Q6ZW05 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCHD4Q6ZW05 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PTCHD4Q6ZW05 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCHD4Q6ZW05 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PTCHD4Q6ZW05 AC135731.1-201ENST00000569415 2548 ntBASIC23.28■■□□□ 1.32
PTCHD4Q6ZW05 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCHD4Q6ZW05 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCHD4Q6ZW05 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PTCHD4Q6ZW05 LINC01003-201ENST00000564834 1764 ntBASIC23.27■■□□□ 1.32
PTCHD4Q6ZW05 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCHD4Q6ZW05 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCHD4Q6ZW05 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC23.27■■□□□ 1.32
PTCHD4Q6ZW05 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PTCHD4Q6ZW05 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
PTCHD4Q6ZW05 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PTCHD4Q6ZW05 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
PTCHD4Q6ZW05 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
PTCHD4Q6ZW05 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.26■■□□□ 1.31
PTCHD4Q6ZW05 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PTCHD4Q6ZW05 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PTCHD4Q6ZW05 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
PTCHD4Q6ZW05 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PTCHD4Q6ZW05 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
PTCHD4Q6ZW05 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PTCHD4Q6ZW05 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
PTCHD4Q6ZW05 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
PTCHD4Q6ZW05 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PTCHD4Q6ZW05 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PTCHD4Q6ZW05 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PTCHD4Q6ZW05 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PTCHD4Q6ZW05 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PTCHD4Q6ZW05 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.23■■□□□ 1.31
PTCHD4Q6ZW05 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PTCHD4Q6ZW05 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PTCHD4Q6ZW05 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PTCHD4Q6ZW05 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PTCHD4Q6ZW05 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.23■■□□□ 1.31
PTCHD4Q6ZW05 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PTCHD4Q6ZW05 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PTCHD4Q6ZW05 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.22■■□□□ 1.31
PTCHD4Q6ZW05 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC23.22■■□□□ 1.31
PTCHD4Q6ZW05 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
PTCHD4Q6ZW05 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.22■■□□□ 1.31
PTCHD4Q6ZW05 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PTCHD4Q6ZW05 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
PTCHD4Q6ZW05 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PTCHD4Q6ZW05 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms