Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 AVO2YMR068W 1281 nt12.43□□□□□ -0.42
RKR1Q04781 LAT1YNL071W 1449 nt12.41□□□□□ -0.42
RKR1Q04781 SSL2YIL143C 2532 nt12.41□□□□□ -0.42
RKR1Q04781 DOC1YGL240W 753 nt12.41□□□□□ -0.42
RKR1Q04781 SPR1YOR190W 1338 nt12.41□□□□□ -0.42
RKR1Q04781 PSP2YML017W 1782 nt12.4□□□□□ -0.42
RKR1Q04781 YAL019W-AYAL019W-A 570 nt12.4□□□□□ -0.42
RKR1Q04781 POR2YIL114C 846 nt12.39□□□□□ -0.43
RKR1Q04781 AAC3YBR085W 924 nt12.39□□□□□ -0.43
RKR1Q04781 SLM3YDL033C 1254 nt12.38□□□□□ -0.43
RKR1Q04781 PIH1YHR034C 1035 nt12.38□□□□□ -0.43
RKR1Q04781 PNS1YOR161C 1620 nt12.36□□□□□ -0.43
RKR1Q04781 TMS1YDR105C 1422 nt12.36□□□□□ -0.43
RKR1Q04781 CYS3YAL012W 1185 nt12.35□□□□□ -0.43
RKR1Q04781 CWP2YKL096W-A 279 nt12.35□□□□□ -0.43
RKR1Q04781 DPL1YDR294C 1770 nt12.35□□□□□ -0.43
RKR1Q04781 YDR467CYDR467C 327 nt12.35□□□□□ -0.43
RKR1Q04781 ODC1YPL134C 933 nt12.35□□□□□ -0.43
RKR1Q04781 ESBP6YNL125C 2022 nt12.34□□□□□ -0.43
RKR1Q04781 YIR035CYIR035C 765 nt12.34□□□□□ -0.43
RKR1Q04781 UME1YPL139C 1383 nt12.33□□□□□ -0.44
RKR1Q04781 MEP1YGR121C 1479 nt12.33□□□□□ -0.44
RKR1Q04781 YJL009WYJL009W 327 nt12.33□□□□□ -0.44
RKR1Q04781 YOX1YML027W 1158 nt12.33□□□□□ -0.44
RKR1Q04781 CPT1YNL130C 1182 nt12.33□□□□□ -0.44
RKR1Q04781 JHD1YER051W 1479 nt12.32□□□□□ -0.44
RKR1Q04781 GAL83YER027C 1254 nt12.32□□□□□ -0.44
RKR1Q04781 ATP23YNR020C 813 nt12.31□□□□□ -0.44
RKR1Q04781 PUS4YNL292W 1212 nt12.3□□□□□ -0.44
RKR1Q04781 BUB2YMR055C 921 nt12.29□□□□□ -0.44
RKR1Q04781 TIM50YPL063W 1431 nt12.28□□□□□ -0.44
RKR1Q04781 HXT8YJL214W 1710 nt12.27□□□□□ -0.45
RKR1Q04781 tE(CUC)DtE(CUC)D 72 nt12.22□□□□□ -0.45
RKR1Q04781 tE(CUC)ItE(CUC)I 72 nt12.22□□□□□ -0.45
RKR1Q04781 YBR056WYBR056W 1506 nt12.22□□□□□ -0.45
RKR1Q04781 LEU4YNL104C 1860 nt12.22□□□□□ -0.45
RKR1Q04781 CMP2YML057W 1815 nt12.21□□□□□ -0.45
RKR1Q04781 YBL111CYBL111C 2004 nt12.21□□□□□ -0.46
RKR1Q04781 YMC2YBR104W 990 nt12.2□□□□□ -0.46
RKR1Q04781 YHR218WYHR218W 1812 nt12.19□□□□□ -0.46
RKR1Q04781 PRE10YOR362C 867 nt12.19□□□□□ -0.46
RKR1Q04781 SPE3YPR069C 882 nt12.19□□□□□ -0.46
RKR1Q04781 PMU1YKL128C 888 nt12.18□□□□□ -0.46
RKR1Q04781 PMP3YDR276C 168 nt12.18□□□□□ -0.46
RKR1Q04781 HIS2YFR025C 1008 nt12.17□□□□□ -0.46
RKR1Q04781 MRS4YKR052C 915 nt12.16□□□□□ -0.46
RKR1Q04781 MDM35YKL053C-A 261 nt12.13□□□□□ -0.47
RKR1Q04781 CST26YBR042C 1194 nt12.12□□□□□ -0.47
RKR1Q04781 ADH6YMR318C 1083 nt12.11□□□□□ -0.47
RKR1Q04781 YMR074CYMR074C 438 nt12.1□□□□□ -0.47
RKR1Q04781 snR86snR86 1004 nt12.09□□□□□ -0.47
RKR1Q04781 AIM46YHR199C 933 nt12.09□□□□□ -0.47
RKR1Q04781 CRN1YLR429W 1956 nt12.09□□□□□ -0.47
RKR1Q04781 LRO1YNR008W 1986 nt12.09□□□□□ -0.47
RKR1Q04781 TPN1YGL186C 1740 nt12.09□□□□□ -0.47
RKR1Q04781 YLR184WYLR184W 348 nt12.07□□□□□ -0.48
RKR1Q04781 AAT1YKL106W 1356 nt12.06□□□□□ -0.48
RKR1Q04781 PLB3YOL011W 2061 nt12.06□□□□□ -0.48
RKR1Q04781 RCF1YML030W 480 nt12.05□□□□□ -0.48
RKR1Q04781 UME6YDR207C 2511 nt12.04□□□□□ -0.48
RKR1Q04781 ZIM17YNL310C 525 nt12.04□□□□□ -0.48
RKR1Q04781 YPQ1YOL092W 927 nt12.04□□□□□ -0.48
RKR1Q04781 MBF1YOR298C-A 456 nt12.04□□□□□ -0.48
RKR1Q04781 MCP1YOR228C 909 nt12.03□□□□□ -0.48
RKR1Q04781 NPP2YEL016C 1482 nt12.02□□□□□ -0.48
RKR1Q04781 KRR1YCL059C 951 nt12.02□□□□□ -0.49
RKR1Q04781 ARG7YMR062C 1326 nt12.02□□□□□ -0.49
RKR1Q04781 ALG7YBR243C 1347 nt12.02□□□□□ -0.49
RKR1Q04781 TRR2YHR106W 1029 nt12.01□□□□□ -0.49
RKR1Q04781 YJR142WYJR142W 1029 nt12□□□□□ -0.49
RKR1Q04781 YGL081WYGL081W 963 nt11.99□□□□□ -0.49
RKR1Q04781 NMA2YGR010W 1188 nt11.99□□□□□ -0.49
RKR1Q04781 YML034C-AYML034C-A 399 nt11.99□□□□□ -0.49
RKR1Q04781 EHT1YBR177C 1356 nt11.98□□□□□ -0.49
RKR1Q04781 BUD31YCR063W 474 nt11.96□□□□□ -0.49
RKR1Q04781 DIP5YPL265W 1827 nt11.96□□□□□ -0.49
RKR1Q04781 CDC3YLR314C 1563 nt11.95□□□□□ -0.5
RKR1Q04781 SPS1YDR523C 1473 nt11.95□□□□□ -0.5
RKR1Q04781 CKI1YLR133W 1749 nt11.95□□□□□ -0.5
RKR1Q04781 PDA1YER178W 1263 nt11.95□□□□□ -0.5
RKR1Q04781 ERV2YPR037C 591 nt11.95□□□□□ -0.5
RKR1Q04781 PSA1YDL055C 1086 nt11.93□□□□□ -0.5
RKR1Q04781 PTH2YBL057C 627 nt11.93□□□□□ -0.5
RKR1Q04781 TES1YJR019C 1050 nt11.92□□□□□ -0.5
RKR1Q04781 AAD14YNL331C 1131 nt11.92□□□□□ -0.5
RKR1Q04781 AGP3YFL055W 1677 nt11.9□□□□□ -0.5
RKR1Q04781 YPL067CYPL067C 597 nt11.89□□□□□ -0.51
RKR1Q04781 MSI1YBR195C 1269 nt11.89□□□□□ -0.51
RKR1Q04781 ARO3YDR035W 1113 nt11.88□□□□□ -0.51
RKR1Q04781 BIO3YNR058W 1443 nt11.88□□□□□ -0.51
RKR1Q04781 QRI5YLR204W 336 nt11.88□□□□□ -0.51
RKR1Q04781 LDB7YBL006C 543 nt11.88□□□□□ -0.51
RKR1Q04781 PRS4YBL068W 981 nt11.88□□□□□ -0.51
RKR1Q04781 LGE1YPL055C 999 nt11.88□□□□□ -0.51
RKR1Q04781 OSM1YJR051W 1506 nt11.87□□□□□ -0.51
RKR1Q04781 HXT10YFL011W 1641 nt11.86□□□□□ -0.51
RKR1Q04781 MPH3YJR160C 1809 nt11.86□□□□□ -0.51
RKR1Q04781 AIM20YIL158W 615 nt11.86□□□□□ -0.51
RKR1Q04781 INO1YJL153C 1602 nt11.85□□□□□ -0.51
RKR1Q04781 STS1YIR011C 960 nt11.85□□□□□ -0.51
Retrieved 100 of 7,029 protein–RNA pairs in 9.1 ms