Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 TRP2YER090W 1524 nt8.29□□□□□ -1.08
RFX1P48743 YIR035CYIR035C 765 nt8.29□□□□□ -1.08
RFX1P48743 YPL108WYPL108W 507 nt8.29□□□□□ -1.08
RFX1P48743 snR4snR4 186 nt8.29□□□□□ -1.08
RFX1P48743 RFC1YOR217W 2586 nt8.28□□□□□ -1.08
RFX1P48743 YDR510C-AYDR510C-A 117 nt8.28□□□□□ -1.08
RFX1P48743 CHS7YHR142W 951 nt8.28□□□□□ -1.08
RFX1P48743 EMC3YKL207W 762 nt8.28□□□□□ -1.08
RFX1P48743 DTR1YBR180W 1719 nt8.28□□□□□ -1.08
RFX1P48743 HXT11YOL156W 1704 nt8.27□□□□□ -1.09
RFX1P48743 YMR007WYMR007W 381 nt8.27□□□□□ -1.09
RFX1P48743 YMR166CYMR166C 1107 nt8.27□□□□□ -1.09
RFX1P48743 MET22YOL064C 1074 nt8.27□□□□□ -1.09
RFX1P48743 OLA1YBR025C 1185 nt8.27□□□□□ -1.09
RFX1P48743 LSP1YPL004C 1026 nt8.27□□□□□ -1.09
RFX1P48743 BUB2YMR055C 921 nt8.26□□□□□ -1.09
RFX1P48743 snR86snR86 1004 nt8.25□□□□□ -1.09
RFX1P48743 THI6YPL214C 1623 nt8.25□□□□□ -1.09
RFX1P48743 CAK1YFL029C 1107 nt8.24□□□□□ -1.09
RFX1P48743 ALR1YOL130W 2580 nt8.24□□□□□ -1.09
RFX1P48743 ADE16YLR028C 1776 nt8.23□□□□□ -1.09
RFX1P48743 OCH1YGL038C 1443 nt8.23□□□□□ -1.09
RFX1P48743 SRM1YGL097W 1449 nt8.23□□□□□ -1.09
RFX1P48743 RNA170RNA170 169 nt8.23□□□□□ -1.09
RFX1P48743 RCR1YBR005W 642 nt8.23□□□□□ -1.09
RFX1P48743 MEP1YGR121C 1479 nt8.22□□□□□ -1.09
RFX1P48743 YIA6YIL006W 1122 nt8.22□□□□□ -1.09
RFX1P48743 PAU21YOR394W 495 nt8.22□□□□□ -1.09
RFX1P48743 PAU22YPL282C 495 nt8.22□□□□□ -1.09
RFX1P48743 YBR056WYBR056W 1506 nt8.21□□□□□ -1.1
RFX1P48743 PDC6YGR087C 1692 nt8.21□□□□□ -1.1
RFX1P48743 RRT14YIL127C 621 nt8.2□□□□□ -1.1
RFX1P48743 MET30YIL046W 1923 nt8.19□□□□□ -1.1
RFX1P48743 SOD2YHR008C 702 nt8.18□□□□□ -1.1
RFX1P48743 YJL160CYJL160C 864 nt8.18□□□□□ -1.1
RFX1P48743 RIB1YBL033C 1038 nt8.18□□□□□ -1.1
RFX1P48743 YNL190WYNL190W 615 nt8.18□□□□□ -1.1
RFX1P48743 FTH1YBR207W 1398 nt8.17□□□□□ -1.1
RFX1P48743 PAB1YER165W 1734 nt8.17□□□□□ -1.1
RFX1P48743 RHO1YPR165W 630 nt8.16□□□□□ -1.1
RFX1P48743 YLR072WYLR072W 2082 nt8.15□□□□□ -1.1
RFX1P48743 PFS2YNL317W 1398 nt8.15□□□□□ -1.1
RFX1P48743 PET18YCR020C 648 nt8.15□□□□□ -1.1
RFX1P48743 YPT31YER031C 672 nt8.14□□□□□ -1.11
RFX1P48743 TOM71YHR117W 1920 nt8.13□□□□□ -1.11
RFX1P48743 YMR210WYMR210W 1350 nt8.13□□□□□ -1.11
RFX1P48743 HSV2YGR223C 1347 nt8.13□□□□□ -1.11
RFX1P48743 ARO7YPR060C 771 nt8.13□□□□□ -1.11
RFX1P48743 HEM14YER014W 1620 nt8.13□□□□□ -1.11
RFX1P48743 THI73YLR004C 1572 nt8.13□□□□□ -1.11
RFX1P48743 LAS17YOR181W 1902 nt8.13□□□□□ -1.11
RFX1P48743 ERG6YML008C 1152 nt8.12□□□□□ -1.11
RFX1P48743 HIS3YOR202W 663 nt8.11□□□□□ -1.11
RFX1P48743 LEA1YPL213W 717 nt8.11□□□□□ -1.11
RFX1P48743 EHT1YBR177C 1356 nt8.1□□□□□ -1.11
RFX1P48743 RPS6AYPL090C 711 nt8.1□□□□□ -1.11
RFX1P48743 RPS6BYBR181C 711 nt8.1□□□□□ -1.11
RFX1P48743 INO1YJL153C 1602 nt8.1□□□□□ -1.11
RFX1P48743 AIM34YMR003W 597 nt8.09□□□□□ -1.11
RFX1P48743 BXI1YNL305C 894 nt8.09□□□□□ -1.11
RFX1P48743 LRO1YNR008W 1986 nt8.09□□□□□ -1.11
RFX1P48743 YPR084WYPR084W 1371 nt8.09□□□□□ -1.12
RFX1P48743 DIA4YHR011W 1341 nt8.08□□□□□ -1.12
RFX1P48743 ABP1YCR088W 1779 nt8.08□□□□□ -1.12
RFX1P48743 PUP3YER094C 618 nt8.08□□□□□ -1.12
RFX1P48743 SHC1YER096W 1539 nt8.08□□□□□ -1.12
RFX1P48743 NDE2YDL085W 1638 nt8.07□□□□□ -1.12
RFX1P48743 YER156CYER156C 1017 nt8.07□□□□□ -1.12
RFX1P48743 MFT1YML062C 1179 nt8.07□□□□□ -1.12
RFX1P48743 YMR206WYMR206W 942 nt8.07□□□□□ -1.12
RFX1P48743 MAS1YLR163C 1389 nt8.07□□□□□ -1.12
RFX1P48743 UTR5YEL035C 501 nt8.06□□□□□ -1.12
RFX1P48743 MDH2YOL126C 1134 nt8.06□□□□□ -1.12
RFX1P48743 BUD31YCR063W 474 nt8.05□□□□□ -1.12
RFX1P48743 YHL030W-AYHL030W-A 462 nt8.04□□□□□ -1.12
RFX1P48743 RCF1YML030W 480 nt8.04□□□□□ -1.12
RFX1P48743 YIL177CYIL177C 5277 nt8.04□□□□□ -1.12
RFX1P48743 MCM5YLR274W 2328 nt8.03□□□□□ -1.12
RFX1P48743 YEL009C-AYEL009C-A 408 nt8.03□□□□□ -1.12
RFX1P48743 SLM3YDL033C 1254 nt8.02□□□□□ -1.13
RFX1P48743 HXT8YJL214W 1710 nt8.02□□□□□ -1.13
RFX1P48743 YRF1-1YDR545W 5391 nt8.02□□□□□ -1.13
RFX1P48743 YRF1-5YLR467W 5391 nt8.02□□□□□ -1.13
RFX1P48743 YRF1-8YOR396W 5391 nt8.02□□□□□ -1.13
RFX1P48743 DIP5YPL265W 1827 nt8.01□□□□□ -1.13
RFX1P48743 TDA4YJR116W 840 nt8.01□□□□□ -1.13
RFX1P48743 PRE10YOR362C 867 nt8.01□□□□□ -1.13
RFX1P48743 YRF1-3YGR296W 5580 nt8.01□□□□□ -1.13
RFX1P48743 YRF1-6YNL339C 5580 nt8.01□□□□□ -1.13
RFX1P48743 YRF1-7YPL283C 5580 nt8.01□□□□□ -1.13
RFX1P48743 RSC4YKR008W 1878 nt8□□□□□ -1.13
RFX1P48743 ITR1YDR497C 1755 nt8□□□□□ -1.13
RFX1P48743 ATP2YJR121W 1536 nt8□□□□□ -1.13
RFX1P48743 GRH1YDR517W 1119 nt8□□□□□ -1.13
RFX1P48743 GLY1YEL046C 1164 nt8□□□□□ -1.13
RFX1P48743 YGR137WYGR137W 375 nt8□□□□□ -1.13
RFX1P48743 YNL140CYNL140C 570 nt8□□□□□ -1.13
RFX1P48743 TGL5YOR081C 2250 nt8□□□□□ -1.13
RFX1P48743 WSC3YOL105C 1671 nt7.99□□□□□ -1.13
RFX1P48743 PMT7YDR307W 1989 nt7.99□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 56 ms