Protein–RNA interactions for Protein: P38915

SPT8, Transcription factor SPT8, yeastyeast

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT8P38915 TOK1YJL093C 2076 nt8.82□□□□□ -1
SPT8P38915 NAP1YKR048C 1254 nt8.81□□□□□ -1
SPT8P38915 RNA170RNA170 169 nt8.81□□□□□ -1
SPT8P38915 MEP1YGR121C 1479 nt8.81□□□□□ -1
SPT8P38915 YLR280CYLR280C 351 nt8.8□□□□□ -1
SPT8P38915 YJL064WYJL064W 396 nt8.79□□□□□ -1
SPT8P38915 ERO1YML130C 1692 nt8.78□□□□□ -1
SPT8P38915 MET22YOL064C 1074 nt8.78□□□□□ -1
SPT8P38915 DIA4YHR011W 1341 nt8.78□□□□□ -1
SPT8P38915 YLR460CYLR460C 1131 nt8.77□□□□□ -1.01
SPT8P38915 PUP1YOR157C 786 nt8.77□□□□□ -1.01
SPT8P38915 PAU19YMR325W 375 nt8.76□□□□□ -1.01
SPT8P38915 PFS2YNL317W 1398 nt8.75□□□□□ -1.01
SPT8P38915 PDC6YGR087C 1692 nt8.75□□□□□ -1.01
SPT8P38915 YCR025CYCR025C 411 nt8.74□□□□□ -1.01
SPT8P38915 BUD31YCR063W 474 nt8.74□□□□□ -1.01
SPT8P38915 SER2YGR208W 930 nt8.74□□□□□ -1.01
SPT8P38915 CHS7YHR142W 951 nt8.74□□□□□ -1.01
SPT8P38915 YRF1-1YDR545W 5391 nt8.73□□□□□ -1.01
SPT8P38915 YRF1-5YLR467W 5391 nt8.73□□□□□ -1.01
SPT8P38915 YRF1-8YOR396W 5391 nt8.73□□□□□ -1.01
SPT8P38915 LRO1YNR008W 1986 nt8.73□□□□□ -1.01
SPT8P38915 EHT1YBR177C 1356 nt8.73□□□□□ -1.01
SPT8P38915 DIP5YPL265W 1827 nt8.72□□□□□ -1.01
SPT8P38915 GLY1YEL046C 1164 nt8.71□□□□□ -1.02
SPT8P38915 HSV2YGR223C 1347 nt8.71□□□□□ -1.02
SPT8P38915 YDR306CYDR306C 1437 nt8.71□□□□□ -1.02
SPT8P38915 OCH1YGL038C 1443 nt8.71□□□□□ -1.02
SPT8P38915 FRA1YLL029W 2250 nt8.7□□□□□ -1.02
SPT8P38915 YMR166CYMR166C 1107 nt8.7□□□□□ -1.02
SPT8P38915 TIF3YPR163C 1311 nt8.7□□□□□ -1.02
SPT8P38915 HTS1YPR033C 1641 nt8.69□□□□□ -1.02
SPT8P38915 MRN1YPL184C 1839 nt8.69□□□□□ -1.02
SPT8P38915 YGR210CYGR210C 1236 nt8.69□□□□□ -1.02
SPT8P38915 OLA1YBR025C 1185 nt8.69□□□□□ -1.02
SPT8P38915 GNP1YDR508C 1992 nt8.68□□□□□ -1.02
SPT8P38915 MDH2YOL126C 1134 nt8.68□□□□□ -1.02
SPT8P38915 NDE2YDL085W 1638 nt8.68□□□□□ -1.02
SPT8P38915 INO1YJL153C 1602 nt8.68□□□□□ -1.02
SPT8P38915 CAK1YFL029C 1107 nt8.67□□□□□ -1.02
SPT8P38915 TDA4YJR116W 840 nt8.67□□□□□ -1.02
SPT8P38915 TGL5YOR081C 2250 nt8.66□□□□□ -1.02
SPT8P38915 YNL140CYNL140C 570 nt8.66□□□□□ -1.02
SPT8P38915 NSG2YNL156C 900 nt8.66□□□□□ -1.02
SPT8P38915 SLG1YOR008C 1137 nt8.66□□□□□ -1.02
SPT8P38915 MET30YIL046W 1923 nt8.65□□□□□ -1.02
SPT8P38915 SLM3YDL033C 1254 nt8.65□□□□□ -1.02
SPT8P38915 YNL190WYNL190W 615 nt8.65□□□□□ -1.02
SPT8P38915 YPL108WYPL108W 507 nt8.65□□□□□ -1.02
SPT8P38915 WSC4YHL028W 1818 nt8.64□□□□□ -1.03
SPT8P38915 SWM1YDR260C 513 nt8.64□□□□□ -1.03
SPT8P38915 INM1YHR046C 888 nt8.63□□□□□ -1.03
SPT8P38915 RCF1YML030W 480 nt8.63□□□□□ -1.03
SPT8P38915 PUP3YER094C 618 nt8.62□□□□□ -1.03
SPT8P38915 RRT14YIL127C 621 nt8.62□□□□□ -1.03
SPT8P38915 RHO1YPR165W 630 nt8.62□□□□□ -1.03
SPT8P38915 TGA1tA(UGC)A 73 nt8.61□□□□□ -1.03
SPT8P38915 tA(UGC)EtA(UGC)E 73 nt8.61□□□□□ -1.03
SPT8P38915 tA(UGC)GtA(UGC)G 73 nt8.61□□□□□ -1.03
SPT8P38915 tA(UGC)LtA(UGC)L 73 nt8.61□□□□□ -1.03
SPT8P38915 tA(UGC)OtA(UGC)O 73 nt8.61□□□□□ -1.03
SPT8P38915 WSC3YOL105C 1671 nt8.61□□□□□ -1.03
SPT8P38915 SHC1YER096W 1539 nt8.6□□□□□ -1.03
SPT8P38915 PMT7YDR307W 1989 nt8.59□□□□□ -1.03
SPT8P38915 AIM34YMR003W 597 nt8.59□□□□□ -1.03
SPT8P38915 LSP1YPL004C 1026 nt8.59□□□□□ -1.03
SPT8P38915 ALG7YBR243C 1347 nt8.58□□□□□ -1.04
SPT8P38915 HXT8YJL214W 1710 nt8.58□□□□□ -1.04
SPT8P38915 ARO3YDR035W 1113 nt8.58□□□□□ -1.04
SPT8P38915 LAS17YOR181W 1902 nt8.58□□□□□ -1.04
SPT8P38915 YCP4YCR004C 744 nt8.56□□□□□ -1.04
SPT8P38915 MRP7YNL005C 1116 nt8.55□□□□□ -1.04
SPT8P38915 THI73YLR004C 1572 nt8.55□□□□□ -1.04
SPT8P38915 ALR1YOL130W 2580 nt8.54□□□□□ -1.04
SPT8P38915 SAM50YNL026W 1455 nt8.54□□□□□ -1.04
SPT8P38915 KTR4YBR199W 1395 nt8.54□□□□□ -1.04
SPT8P38915 YHL030W-AYHL030W-A 462 nt8.54□□□□□ -1.04
SPT8P38915 MET13YGL125W 1803 nt8.53□□□□□ -1.04
SPT8P38915 YER156CYER156C 1017 nt8.53□□□□□ -1.04
SPT8P38915 RPL2AYFR031C-A 765 nt8.53□□□□□ -1.04
SPT8P38915 YGR137WYGR137W 375 nt8.53□□□□□ -1.04
SPT8P38915 ITR1YDR497C 1755 nt8.53□□□□□ -1.04
SPT8P38915 PET18YCR020C 648 nt8.52□□□□□ -1.05
SPT8P38915 YJL160CYJL160C 864 nt8.52□□□□□ -1.05
SPT8P38915 TIM50YPL063W 1431 nt8.52□□□□□ -1.05
SPT8P38915 PMT1YDL095W 2454 nt8.51□□□□□ -1.05
SPT8P38915 BXI1YNL305C 894 nt8.51□□□□□ -1.05
SPT8P38915 PRC1YMR297W 1599 nt8.51□□□□□ -1.05
SPT8P38915 YPT31YER031C 672 nt8.5□□□□□ -1.05
SPT8P38915 FCY1YPR062W 477 nt8.5□□□□□ -1.05
SPT8P38915 YEL034C-AYEL034C-A 603 nt8.49□□□□□ -1.05
SPT8P38915 ELP6YMR312W 822 nt8.48□□□□□ -1.05
SPT8P38915 PRE10YOR362C 867 nt8.48□□□□□ -1.05
SPT8P38915 YMR007WYMR007W 381 nt8.47□□□□□ -1.05
SPT8P38915 YLR173WYLR173W 1827 nt8.47□□□□□ -1.05
SPT8P38915 JHD1YER051W 1479 nt8.46□□□□□ -1.05
SPT8P38915 ATP2YJR121W 1536 nt8.46□□□□□ -1.05
SPT8P38915 RPS6AYPL090C 711 nt8.46□□□□□ -1.06
SPT8P38915 YPL264CYPL264C 1062 nt8.46□□□□□ -1.06
SPT8P38915 RPS6BYBR181C 711 nt8.46□□□□□ -1.06
Retrieved 100 of 7,029 protein–RNA pairs in 42.2 ms