Protein–RNA interactions for Protein: P38798

NMD2, Nonsense-mediated mRNA decay protein 2, yeastyeast

Known RBP Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD2P38798 THI6YPL214C 1623 nt9.71□□□□□ -0.85
NMD2P38798 RNA170RNA170 169 nt9.71□□□□□ -0.86
NMD2P38798 MET22YOL064C 1074 nt9.71□□□□□ -0.86
NMD2P38798 YLR072WYLR072W 2082 nt9.7□□□□□ -0.86
NMD2P38798 CHS7YHR142W 951 nt9.7□□□□□ -0.86
NMD2P38798 YJL009WYJL009W 327 nt9.7□□□□□ -0.86
NMD2P38798 BUB2YMR055C 921 nt9.7□□□□□ -0.86
NMD2P38798 HXT11YOL156W 1704 nt9.69□□□□□ -0.86
NMD2P38798 OCH1YGL038C 1443 nt9.68□□□□□ -0.86
NMD2P38798 MGM101YJR144W 810 nt9.68□□□□□ -0.86
NMD2P38798 YMR007WYMR007W 381 nt9.68□□□□□ -0.86
NMD2P38798 EMC3YKL207W 762 nt9.67□□□□□ -0.86
NMD2P38798 LSP1YPL004C 1026 nt9.67□□□□□ -0.86
NMD2P38798 PDC6YGR087C 1692 nt9.67□□□□□ -0.86
NMD2P38798 CAK1YFL029C 1107 nt9.66□□□□□ -0.86
NMD2P38798 YJL160CYJL160C 864 nt9.65□□□□□ -0.86
NMD2P38798 MEP1YGR121C 1479 nt9.65□□□□□ -0.87
NMD2P38798 OLA1YBR025C 1185 nt9.64□□□□□ -0.87
NMD2P38798 PET18YCR020C 648 nt9.63□□□□□ -0.87
NMD2P38798 COG1YGL223C 1254 nt9.63□□□□□ -0.87
NMD2P38798 YIA6YIL006W 1122 nt9.63□□□□□ -0.87
NMD2P38798 RRT14YIL127C 621 nt9.61□□□□□ -0.87
NMD2P38798 FIT1YDR534C 1587 nt9.61□□□□□ -0.87
NMD2P38798 SRM1YGL097W 1449 nt9.6□□□□□ -0.87
NMD2P38798 RIB1YBL033C 1038 nt9.59□□□□□ -0.87
NMD2P38798 RCR1YBR005W 642 nt9.59□□□□□ -0.87
NMD2P38798 tD(GUC)BtD(GUC)B 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)DtD(GUC)D 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)G1tD(GUC)G1 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)G2tD(GUC)G2 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)I1tD(GUC)I1 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)I2tD(GUC)I2 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)J1tD(GUC)J1 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)J2tD(GUC)J2 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)J3tD(GUC)J3 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)J4tD(GUC)J4 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)KtD(GUC)K 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)L1tD(GUC)L1 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)L2tD(GUC)L2 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)MtD(GUC)M 72 nt9.58□□□□□ -0.88
NMD2P38798 tD(GUC)OtD(GUC)O 72 nt9.58□□□□□ -0.88
NMD2P38798 RHO1YPR165W 630 nt9.57□□□□□ -0.88
NMD2P38798 ABP1YCR088W 1779 nt9.56□□□□□ -0.88
NMD2P38798 RTG2YGL252C 1767 nt9.56□□□□□ -0.88
NMD2P38798 YMR210WYMR210W 1350 nt9.56□□□□□ -0.88
NMD2P38798 SOD2YHR008C 702 nt9.56□□□□□ -0.88
NMD2P38798 YHR131CYHR131C 2553 nt9.55□□□□□ -0.88
NMD2P38798 FAF1YIL019W 1041 nt9.55□□□□□ -0.88
NMD2P38798 LEA1YPL213W 717 nt9.55□□□□□ -0.88
NMD2P38798 LRO1YNR008W 1986 nt9.54□□□□□ -0.88
NMD2P38798 YER156CYER156C 1017 nt9.54□□□□□ -0.88
NMD2P38798 HIS3YOR202W 663 nt9.54□□□□□ -0.88
NMD2P38798 SHC1YER096W 1539 nt9.54□□□□□ -0.88
NMD2P38798 YRF1-3YGR296W 5580 nt9.54□□□□□ -0.88
NMD2P38798 YRF1-6YNL339C 5580 nt9.54□□□□□ -0.88
NMD2P38798 YRF1-7YPL283C 5580 nt9.54□□□□□ -0.88
NMD2P38798 BXI1YNL305C 894 nt9.53□□□□□ -0.88
NMD2P38798 EHT1YBR177C 1356 nt9.52□□□□□ -0.88
NMD2P38798 YLR173WYLR173W 1827 nt9.52□□□□□ -0.89
NMD2P38798 PUP3YER094C 618 nt9.52□□□□□ -0.89
NMD2P38798 ERG6YML008C 1152 nt9.52□□□□□ -0.89
NMD2P38798 CSM2YIL132C 642 nt9.51□□□□□ -0.89
NMD2P38798 RPS6AYPL090C 711 nt9.51□□□□□ -0.89
NMD2P38798 RPS6BYBR181C 711 nt9.51□□□□□ -0.89
NMD2P38798 MET30YIL046W 1923 nt9.5□□□□□ -0.89
NMD2P38798 THI73YLR004C 1572 nt9.5□□□□□ -0.89
NMD2P38798 BUD31YCR063W 474 nt9.5□□□□□ -0.89
NMD2P38798 YGR139WYGR139W 339 nt9.5□□□□□ -0.89
NMD2P38798 DIP5YPL265W 1827 nt9.49□□□□□ -0.89
NMD2P38798 DUR3YHL016C 2208 nt9.48□□□□□ -0.89
NMD2P38798 HBS1YKR084C 1836 nt9.48□□□□□ -0.89
NMD2P38798 YPT31YER031C 672 nt9.48□□□□□ -0.89
NMD2P38798 MIM1YOL026C 342 nt9.48□□□□□ -0.89
NMD2P38798 INO1YJL153C 1602 nt9.48□□□□□ -0.89
NMD2P38798 FTH1YBR207W 1398 nt9.48□□□□□ -0.89
NMD2P38798 UTR5YEL035C 501 nt9.47□□□□□ -0.89
NMD2P38798 RCF1YML030W 480 nt9.47□□□□□ -0.89
NMD2P38798 HXT8YJL214W 1710 nt9.46□□□□□ -0.89
NMD2P38798 ORT1YOR130C 879 nt9.45□□□□□ -0.9
NMD2P38798 YPR084WYPR084W 1371 nt9.45□□□□□ -0.9
NMD2P38798 MFT1YML062C 1179 nt9.44□□□□□ -0.9
NMD2P38798 YNL190WYNL190W 615 nt9.44□□□□□ -0.9
NMD2P38798 YTH1YPR107C 627 nt9.44□□□□□ -0.9
NMD2P38798 ATG22YCL038C 1587 nt9.44□□□□□ -0.9
NMD2P38798 NDE2YDL085W 1638 nt9.44□□□□□ -0.9
NMD2P38798 GCD11YER025W 1584 nt9.43□□□□□ -0.9
NMD2P38798 YHL030W-AYHL030W-A 462 nt9.43□□□□□ -0.9
NMD2P38798 IDP3YNL009W 1263 nt9.43□□□□□ -0.9
NMD2P38798 ATP2YJR121W 1536 nt9.42□□□□□ -0.9
NMD2P38798 YIL177CYIL177C 5277 nt9.42□□□□□ -0.9
NMD2P38798 TIM50YPL063W 1431 nt9.42□□□□□ -0.9
NMD2P38798 ADA2YDR448W 1305 nt9.42□□□□□ -0.9
NMD2P38798 POP2YNR052C 1302 nt9.42□□□□□ -0.9
NMD2P38798 GLY1YEL046C 1164 nt9.42□□□□□ -0.9
NMD2P38798 TDA4YJR116W 840 nt9.41□□□□□ -0.9
NMD2P38798 YMR206WYMR206W 942 nt9.41□□□□□ -0.9
NMD2P38798 YER152W-AYER152W-A 567 nt9.4□□□□□ -0.9
NMD2P38798 TGL5YOR081C 2250 nt9.4□□□□□ -0.9
NMD2P38798 MRN1YPL184C 1839 nt9.4□□□□□ -0.91
NMD2P38798 TIF3YPR163C 1311 nt9.39□□□□□ -0.91
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms