Protein–RNA interactions for Protein: P38779

CIC1, Proteasome-interacting protein CIC1, yeastyeast

Known RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CIC1P38779 YRF1-2YER190W 5046 nt9.37□□□□□ -0.91
CIC1P38779 MET22YOL064C 1074 nt9.37□□□□□ -0.91
CIC1P38779 FCY1YPR062W 477 nt9.37□□□□□ -0.91
CIC1P38779 YMR166CYMR166C 1107 nt9.36□□□□□ -0.91
CIC1P38779 TPN1YGL186C 1740 nt9.36□□□□□ -0.91
CIC1P38779 YHL008CYHL008C 1884 nt9.35□□□□□ -0.91
CIC1P38779 NBA1YOL070C 1506 nt9.35□□□□□ -0.91
CIC1P38779 YJR149WYJR149W 1215 nt9.34□□□□□ -0.91
CIC1P38779 YMR007WYMR007W 381 nt9.34□□□□□ -0.91
CIC1P38779 YBR056WYBR056W 1506 nt9.34□□□□□ -0.91
CIC1P38779 OCH1YGL038C 1443 nt9.33□□□□□ -0.92
CIC1P38779 TRP2YER090W 1524 nt9.33□□□□□ -0.92
CIC1P38779 snR86snR86 1004 nt9.33□□□□□ -0.92
CIC1P38779 YIR035CYIR035C 765 nt9.33□□□□□ -0.92
CIC1P38779 YJL160CYJL160C 864 nt9.33□□□□□ -0.92
CIC1P38779 YLR460CYLR460C 1131 nt9.33□□□□□ -0.92
CIC1P38779 YLR072WYLR072W 2082 nt9.33□□□□□ -0.92
CIC1P38779 PET18YCR020C 648 nt9.32□□□□□ -0.92
CIC1P38779 CAK1YFL029C 1107 nt9.32□□□□□ -0.92
CIC1P38779 YIA6YIL006W 1122 nt9.32□□□□□ -0.92
CIC1P38779 LSP1YPL004C 1026 nt9.32□□□□□ -0.92
CIC1P38779 THI6YPL214C 1623 nt9.31□□□□□ -0.92
CIC1P38779 BUB2YMR055C 921 nt9.31□□□□□ -0.92
CIC1P38779 PDC6YGR087C 1692 nt9.3□□□□□ -0.92
CIC1P38779 CHS7YHR142W 951 nt9.3□□□□□ -0.92
CIC1P38779 HXT11YOL156W 1704 nt9.3□□□□□ -0.92
CIC1P38779 YJL009WYJL009W 327 nt9.29□□□□□ -0.92
CIC1P38779 HMT1YBR034C 1047 nt9.29□□□□□ -0.92
CIC1P38779 PUS7YOR243C 2031 nt9.29□□□□□ -0.92
CIC1P38779 MEP1YGR121C 1479 nt9.28□□□□□ -0.92
CIC1P38779 YIR018C-AYIR018C-A 138 nt9.28□□□□□ -0.92
CIC1P38779 RIB1YBL033C 1038 nt9.28□□□□□ -0.92
CIC1P38779 EMC3YKL207W 762 nt9.27□□□□□ -0.93
CIC1P38779 SOD2YHR008C 702 nt9.26□□□□□ -0.93
CIC1P38779 RRT14YIL127C 621 nt9.25□□□□□ -0.93
CIC1P38779 ERG6YML008C 1152 nt9.25□□□□□ -0.93
CIC1P38779 OLA1YBR025C 1185 nt9.24□□□□□ -0.93
CIC1P38779 YMR210WYMR210W 1350 nt9.24□□□□□ -0.93
CIC1P38779 MCM5YLR274W 2328 nt9.23□□□□□ -0.93
CIC1P38779 RCR1YBR005W 642 nt9.23□□□□□ -0.93
CIC1P38779 SRM1YGL097W 1449 nt9.22□□□□□ -0.93
CIC1P38779 BMT5YIL096C 1011 nt9.22□□□□□ -0.93
CIC1P38779 SHC1YER096W 1539 nt9.21□□□□□ -0.93
CIC1P38779 HEM14YER014W 1620 nt9.21□□□□□ -0.93
CIC1P38779 YNL165WYNL165W 1221 nt9.21□□□□□ -0.94
CIC1P38779 YPL071CYPL071C 471 nt9.21□□□□□ -0.94
CIC1P38779 RHO1YPR165W 630 nt9.21□□□□□ -0.94
CIC1P38779 ABP1YCR088W 1779 nt9.2□□□□□ -0.94
CIC1P38779 YER156CYER156C 1017 nt9.2□□□□□ -0.94
CIC1P38779 BXI1YNL305C 894 nt9.2□□□□□ -0.94
CIC1P38779 UTR5YEL035C 501 nt9.19□□□□□ -0.94
CIC1P38779 RPS6AYPL090C 711 nt9.19□□□□□ -0.94
CIC1P38779 RPS6BYBR181C 711 nt9.19□□□□□ -0.94
CIC1P38779 LRO1YNR008W 1986 nt9.19□□□□□ -0.94
CIC1P38779 SWP1YMR149W 861 nt9.18□□□□□ -0.94
CIC1P38779 EHT1YBR177C 1356 nt9.17□□□□□ -0.94
CIC1P38779 tD(GUC)BtD(GUC)B 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)DtD(GUC)D 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)G1tD(GUC)G1 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)G2tD(GUC)G2 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)I1tD(GUC)I1 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)I2tD(GUC)I2 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)J1tD(GUC)J1 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)J2tD(GUC)J2 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)J3tD(GUC)J3 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)J4tD(GUC)J4 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)KtD(GUC)K 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)L1tD(GUC)L1 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)L2tD(GUC)L2 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)MtD(GUC)M 72 nt9.16□□□□□ -0.94
CIC1P38779 tD(GUC)OtD(GUC)O 72 nt9.16□□□□□ -0.94
CIC1P38779 PUP3YER094C 618 nt9.16□□□□□ -0.94
CIC1P38779 LEA1YPL213W 717 nt9.16□□□□□ -0.94
CIC1P38779 RMA1YKL132C 1293 nt9.15□□□□□ -0.94
CIC1P38779 HIS3YOR202W 663 nt9.15□□□□□ -0.94
CIC1P38779 THI73YLR004C 1572 nt9.15□□□□□ -0.95
CIC1P38779 YER152W-AYER152W-A 567 nt9.14□□□□□ -0.95
CIC1P38779 IDP3YNL009W 1263 nt9.14□□□□□ -0.95
CIC1P38779 DIP5YPL265W 1827 nt9.14□□□□□ -0.95
CIC1P38779 POP2YNR052C 1302 nt9.13□□□□□ -0.95
CIC1P38779 HXT8YJL214W 1710 nt9.12□□□□□ -0.95
CIC1P38779 BUD31YCR063W 474 nt9.12□□□□□ -0.95
CIC1P38779 ADA2YDR448W 1305 nt9.11□□□□□ -0.95
CIC1P38779 HXK1YFR053C 1458 nt9.11□□□□□ -0.95
CIC1P38779 YPT31YER031C 672 nt9.1□□□□□ -0.95
CIC1P38779 ATP2YJR121W 1536 nt9.1□□□□□ -0.95
CIC1P38779 INO1YJL153C 1602 nt9.09□□□□□ -0.95
CIC1P38779 ATG22YCL038C 1587 nt9.09□□□□□ -0.95
CIC1P38779 GRH1YDR517W 1119 nt9.09□□□□□ -0.95
CIC1P38779 MFT1YML062C 1179 nt9.09□□□□□ -0.95
CIC1P38779 ALD5YER073W 1563 nt9.08□□□□□ -0.96
CIC1P38779 EEB1YPL095C 1371 nt9.08□□□□□ -0.96
CIC1P38779 UTP6YDR449C 1323 nt9.07□□□□□ -0.96
CIC1P38779 RCF1YML030W 480 nt9.07□□□□□ -0.96
CIC1P38779 YPR084WYPR084W 1371 nt9.07□□□□□ -0.96
CIC1P38779 HBS1YKR084C 1836 nt9.06□□□□□ -0.96
CIC1P38779 YHL030W-AYHL030W-A 462 nt9.06□□□□□ -0.96
CIC1P38779 YJL211CYJL211C 444 nt9.06□□□□□ -0.96
CIC1P38779 MIM1YOL026C 342 nt9.06□□□□□ -0.96
CIC1P38779 JHD1YER051W 1479 nt9.06□□□□□ -0.96
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms