Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 ENO2YHR174W 1314 nt7.64□□□□□ -1.19
PUB1P32588 YDL158CYDL158C 309 nt7.64□□□□□ -1.19
PUB1P32588 YGR011WYGR011W 327 nt7.64□□□□□ -1.19
PUB1P32588 RSA3YLR221C 663 nt7.64□□□□□ -1.19
PUB1P32588 TIF34YMR146C 1044 nt7.64□□□□□ -1.19
PUB1P32588 MIM1YOL026C 342 nt7.64□□□□□ -1.19
PUB1P32588 MEX67YPL169C 1800 nt7.64□□□□□ -1.19
PUB1P32588 AMF1YOR378W 1548 nt7.63□□□□□ -1.19
PUB1P32588 KGD2YDR148C 1392 nt7.63□□□□□ -1.19
PUB1P32588 MTO1YGL236C 2010 nt7.63□□□□□ -1.19
PUB1P32588 YHR054CYHR054C 1065 nt7.63□□□□□ -1.19 RIP-Chip
PUB1P32588 MRS3YJL133W 945 nt7.63□□□□□ -1.19 RIP-Chip
PUB1P32588 COA2YPL189C-A 207 nt7.63□□□□□ -1.19 RIP-Chip
PUB1P32588 KDX1YKL161C 1302 nt7.62□□□□□ -1.19
PUB1P32588 YJR056CYJR056C 711 nt7.62□□□□□ -1.19 RIP-Chip
PUB1P32588 YMC2YBR104W 990 nt7.62□□□□□ -1.19
PUB1P32588 TRP2YER090W 1524 nt7.62□□□□□ -1.19
PUB1P32588 YKL053WYKL053W 375 nt7.61□□□□□ -1.19
PUB1P32588 YNL165WYNL165W 1221 nt7.61□□□□□ -1.19
PUB1P32588 PGC1YPL206C 966 nt7.61□□□□□ -1.19 RIP-Chip
PUB1P32588 GAT1YFL021W 1533 nt7.61□□□□□ -1.19
PUB1P32588 THI72YOR192C 1800 nt7.61□□□□□ -1.19
PUB1P32588 THI6YPL214C 1623 nt7.6□□□□□ -1.19
PUB1P32588 PAU5YFL020C 369 nt7.6□□□□□ -1.19
PUB1P32588 SEN2YLR105C 1134 nt7.6□□□□□ -1.19
PUB1P32588 GGA2YHR108W 1758 nt7.6□□□□□ -1.19
PUB1P32588 AAT1YKL106W 1356 nt7.59□□□□□ -1.19 RIP-Chip
PUB1P32588 NPP1YCR026C 2229 nt7.59□□□□□ -1.19
PUB1P32588 THI3YDL080C 1830 nt7.59□□□□□ -1.19
PUB1P32588 HBS1YKR084C 1836 nt7.59□□□□□ -1.19
PUB1P32588 MMS21YEL019C 804 nt7.58□□□□□ -1.2
PUB1P32588 SBP1YHL034C 885 nt7.58□□□□□ -1.2
PUB1P32588 PRM4YPL156C 855 nt7.58□□□□□ -1.2 RIP-Chip
PUB1P32588 HXT11YOL156W 1704 nt7.58□□□□□ -1.2
PUB1P32588 EMC3YKL207W 762 nt7.57□□□□□ -1.2 RIP-Chip
PUB1P32588 YMR114CYMR114C 1107 nt7.57□□□□□ -1.2
PUB1P32588 YNL319WYNL319W 441 nt7.57□□□□□ -1.2
PUB1P32588 MHF1YOL086W-A 273 nt7.57□□□□□ -1.2
PUB1P32588 YBR232CYBR232C 360 nt7.57□□□□□ -1.2
PUB1P32588 SIR2YDL042C 1689 nt7.57□□□□□ -1.2
PUB1P32588 LYS12YIL094C 1116 nt7.56□□□□□ -1.2
PUB1P32588 ECM9YKR004C 1134 nt7.56□□□□□ -1.2 RIP-Chip
PUB1P32588 FRE6YLL051C 2139 nt7.56□□□□□ -1.2 RIP-Chip
PUB1P32588 YLR283WYLR283W 945 nt7.56□□□□□ -1.2
PUB1P32588 YOL107WYOL107W 1029 nt7.56□□□□□ -1.2 RIP-Chip
PUB1P32588 PUP1YOR157C 786 nt7.56□□□□□ -1.2
PUB1P32588 SAN1YDR143C 1833 nt7.55□□□□□ -1.2 RIP-Chip
PUB1P32588 YMR316C-BYMR316C-B 309 nt7.55□□□□□ -1.2
PUB1P32588 OCA1YNL099C 717 nt7.55□□□□□ -1.2
PUB1P32588 YNL303WYNL303W 348 nt7.55□□□□□ -1.2
PUB1P32588 OSW1YOR255W 837 nt7.55□□□□□ -1.2
PUB1P32588 SLX1YBR228W 915 nt7.55□□□□□ -1.2 RIP-Chip
PUB1P32588 EEB1YPL095C 1371 nt7.55□□□□□ -1.2 RIP-Chip
PUB1P32588 TPC1YGR096W 945 nt7.54□□□□□ -1.2
PUB1P32588 MRS4YKR052C 915 nt7.54□□□□□ -1.2
PUB1P32588 ORT1YOR130C 879 nt7.54□□□□□ -1.2
PUB1P32588 NUF2YOL069W 1356 nt7.54□□□□□ -1.2 RIP-Chip
PUB1P32588 RRP1YDR087C 837 nt7.53□□□□□ -1.2
PUB1P32588 YER147C-AYER147C-A 411 nt7.53□□□□□ -1.2
PUB1P32588 NAP1YKR048C 1254 nt7.53□□□□□ -1.2
PUB1P32588 CSI1YMR025W 888 nt7.53□□□□□ -1.2
PUB1P32588 PEX12YMR026C 1200 nt7.53□□□□□ -1.2 RIP-Chip
PUB1P32588 YMR119W-AYMR119W-A 375 nt7.53□□□□□ -1.2
PUB1P32588 LEU2YCL018W 1095 nt7.53□□□□□ -1.2
PUB1P32588 MAF1YDR005C 1188 nt7.52□□□□□ -1.21 RIP-Chip
PUB1P32588 MSA2YKR077W 1092 nt7.52□□□□□ -1.21
PUB1P32588 STP3YLR375W 1032 nt7.52□□□□□ -1.21 RIP-Chip
PUB1P32588 TAF13YML098W 504 nt7.52□□□□□ -1.21
PUB1P32588 snR34snR34 203 nt7.52□□□□□ -1.21
PUB1P32588 SRP54YPR088C 1626 nt7.51□□□□□ -1.21
PUB1P32588 SRM1YGL097W 1449 nt7.51□□□□□ -1.21
PUB1P32588 TPN1YGL186C 1740 nt7.5□□□□□ -1.21
PUB1P32588 DUR3YHL016C 2208 nt7.5□□□□□ -1.21
PUB1P32588 GID7YCL039W 2238 nt7.5□□□□□ -1.21
PUB1P32588 POT1YIL160C 1254 nt7.5□□□□□ -1.21
PUB1P32588 LIP2YLR239C 987 nt7.5□□□□□ -1.21
PUB1P32588 YPR150WYPR150W 522 nt7.5□□□□□ -1.21
PUB1P32588 NAM8YHR086W 1572 nt7.5□□□□□ -1.21 RIP-Chip
PUB1P32588 YJL064WYJL064W 396 nt7.49□□□□□ -1.21
PUB1P32588 YJL211CYJL211C 444 nt7.49□□□□□ -1.21
PUB1P32588 SUT2YPR009W 807 nt7.49□□□□□ -1.21
PUB1P32588 RER1YCL001W 567 nt7.49□□□□□ -1.21 RIP-Chip
PUB1P32588 PUS9YDL036C 1389 nt7.48□□□□□ -1.21
PUB1P32588 AAC3YBR085W 924 nt7.48□□□□□ -1.21
PUB1P32588 snR4snR4 186 nt7.48□□□□□ -1.21
PUB1P32588 GAS1YMR307W 1680 nt7.47□□□□□ -1.21 RIP-Chip
PUB1P32588 YMR210WYMR210W 1350 nt7.47□□□□□ -1.21 RIP-Chip
PUB1P32588 YRF1-3YGR296W 5580 nt7.47□□□□□ -1.21
PUB1P32588 YRF1-6YNL339C 5580 nt7.47□□□□□ -1.21
PUB1P32588 YRF1-7YPL283C 5580 nt7.47□□□□□ -1.21
PUB1P32588 YIL177CYIL177C 5277 nt7.47□□□□□ -1.21
PUB1P32588 YLR072WYLR072W 2082 nt7.47□□□□□ -1.21
PUB1P32588 URA8YJR103W 1737 nt7.47□□□□□ -1.21
PUB1P32588 MDL2YPL270W 2322 nt7.46□□□□□ -1.21
PUB1P32588 snR86snR86 1004 nt7.46□□□□□ -1.22
PUB1P32588 RAI1YGL246C 1164 nt7.46□□□□□ -1.22
PUB1P32588 YGR283CYGR283C 1026 nt7.46□□□□□ -1.22 RIP-Chip
PUB1P32588 REX2YLR059C 810 nt7.46□□□□□ -1.22
PUB1P32588 PTC6YCR079W 1329 nt7.46□□□□□ -1.22 RIP-Chip
PUB1P32588 ERG12YMR208W 1332 nt7.46□□□□□ -1.22 RIP-Chip
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms