Protein–RNA interactions for Protein: P0CX68

TY1A-LR1, Transposon Ty1-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR1P0CX68 YCR102CYCR102C 1107 nt8.86□□□□□ -0.99
TY1A-LR1P0CX68 SOR2YDL246C 1074 nt8.86□□□□□ -0.99
TY1A-LR1P0CX68 MCM21YDR318W 1107 nt8.86□□□□□ -0.99
TY1A-LR1P0CX68 YUH1YJR099W 711 nt8.86□□□□□ -0.99
TY1A-LR1P0CX68 SOR1YJR159W 1074 nt8.86□□□□□ -0.99
TY1A-LR1P0CX68 YKL091CYKL091C 933 nt8.86□□□□□ -0.99
TY1A-LR1P0CX68 RAS1YOR101W 930 nt8.86□□□□□ -0.99
TY1A-LR1P0CX68 YPR177CYPR177C 372 nt8.86□□□□□ -0.99
TY1A-LR1P0CX68 PCL9YDL179W 915 nt8.85□□□□□ -0.99
TY1A-LR1P0CX68 YGL218WYGL218W 651 nt8.85□□□□□ -0.99
TY1A-LR1P0CX68 HYM1YKL189W 1200 nt8.85□□□□□ -0.99
TY1A-LR1P0CX68 TEP1YNL128W 1305 nt8.84□□□□□ -0.99
TY1A-LR1P0CX68 GAL1YBR020W 1587 nt8.84□□□□□ -0.99
TY1A-LR1P0CX68 snR37snR37 386 nt8.84□□□□□ -0.99
TY1A-LR1P0CX68 CTF18YMR078C 2226 nt8.83□□□□□ -1
TY1A-LR1P0CX68 SEN2YLR105C 1134 nt8.83□□□□□ -1
TY1A-LR1P0CX68 PHA2YNL316C 1005 nt8.83□□□□□ -1
TY1A-LR1P0CX68 VPS68YOL129W 555 nt8.83□□□□□ -1
TY1A-LR1P0CX68 RRP36YOR287C 903 nt8.83□□□□□ -1
TY1A-LR1P0CX68 ANP1YEL036C 1503 nt8.83□□□□□ -1
TY1A-LR1P0CX68 YDR042CYDR042C 603 nt8.82□□□□□ -1
TY1A-LR1P0CX68 PIB1YDR313C 861 nt8.82□□□□□ -1
TY1A-LR1P0CX68 YHL045WYHL045W 348 nt8.82□□□□□ -1
TY1A-LR1P0CX68 YAL026C-AYAL026C-A 438 nt8.82□□□□□ -1
TY1A-LR1P0CX68 OST3YOR085W 1053 nt8.82□□□□□ -1
TY1A-LR1P0CX68 LEU2YCL018W 1095 nt8.82□□□□□ -1
TY1A-LR1P0CX68 STR3YGL184C 1398 nt8.82□□□□□ -1
TY1A-LR1P0CX68 RKM4YDR257C 1485 nt8.82□□□□□ -1
TY1A-LR1P0CX68 YGL114WYGL114W 2178 nt8.82□□□□□ -1
TY1A-LR1P0CX68 YDR306CYDR306C 1437 nt8.81□□□□□ -1
TY1A-LR1P0CX68 YDL086C-AYDL086C-A 435 nt8.81□□□□□ -1
TY1A-LR1P0CX68 YSC83YHR017W 1158 nt8.81□□□□□ -1
TY1A-LR1P0CX68 YOL050CYOL050C 321 nt8.81□□□□□ -1
TY1A-LR1P0CX68 YOR020W-AYOR020W-A 273 nt8.81□□□□□ -1
TY1A-LR1P0CX68 ATG23YLR431C 1362 nt8.81□□□□□ -1
TY1A-LR1P0CX68 PAF1YBR279W 1338 nt8.8□□□□□ -1
TY1A-LR1P0CX68 YCR016WYCR016W 873 nt8.8□□□□□ -1
TY1A-LR1P0CX68 SPO16YHR153C 597 nt8.8□□□□□ -1
TY1A-LR1P0CX68 YJL047C-AYJL047C-A 135 nt8.8□□□□□ -1
TY1A-LR1P0CX68 XPT1YJR133W 630 nt8.8□□□□□ -1
TY1A-LR1P0CX68 MUP1YGR055W 1725 nt8.8□□□□□ -1
TY1A-LR1P0CX68 RRI1YDL216C 1323 nt8.8□□□□□ -1
TY1A-LR1P0CX68 MPC54YOR177C 1395 nt8.79□□□□□ -1
TY1A-LR1P0CX68 LUC7YDL087C 786 nt8.79□□□□□ -1
TY1A-LR1P0CX68 YDR222WYDR222W 1248 nt8.79□□□□□ -1
TY1A-LR1P0CX68 ERG20YJL167W 1059 nt8.79□□□□□ -1
TY1A-LR1P0CX68 DID2YKR035W-A 615 nt8.79□□□□□ -1
TY1A-LR1P0CX68 RNH1YMR234W 1047 nt8.79□□□□□ -1
TY1A-LR1P0CX68 RUF20RUF20 443 nt8.79□□□□□ -1
TY1A-LR1P0CX68 CBP6YBR120C 489 nt8.79□□□□□ -1
TY1A-LR1P0CX68 DUT1YBR252W 444 nt8.79□□□□□ -1
TY1A-LR1P0CX68 MAE1YKL029C 2010 nt8.78□□□□□ -1
TY1A-LR1P0CX68 YFH7YFR007W 1062 nt8.78□□□□□ -1
TY1A-LR1P0CX68 MDM12YOL009C 816 nt8.78□□□□□ -1
TY1A-LR1P0CX68 DDR2YOL052C-A 186 nt8.78□□□□□ -1
TY1A-LR1P0CX68 COG2YGR120C 789 nt8.77□□□□□ -1.01
TY1A-LR1P0CX68 WHI5YOR083W 888 nt8.77□□□□□ -1.01
TY1A-LR1P0CX68 MXR2YCL033C 507 nt8.77□□□□□ -1.01
TY1A-LR1P0CX68 OMS1YDR316W 1416 nt8.77□□□□□ -1.01
TY1A-LR1P0CX68 SFP1YLR403W 2052 nt8.77□□□□□ -1.01
TY1A-LR1P0CX68 RRP14YKL082C 1305 nt8.77□□□□□ -1.01
TY1A-LR1P0CX68 BNA2YJR078W 1362 nt8.76□□□□□ -1.01
TY1A-LR1P0CX68 TRP1YDR007W 675 nt8.76□□□□□ -1.01
TY1A-LR1P0CX68 RRF1YHR038W 693 nt8.76□□□□□ -1.01
TY1A-LR1P0CX68 LPX1YOR084W 1164 nt8.76□□□□□ -1.01
TY1A-LR1P0CX68 DRN1YGR093W 1524 nt8.75□□□□□ -1.01
TY1A-LR1P0CX68 NSA1YGL111W 1392 nt8.75□□□□□ -1.01
TY1A-LR1P0CX68 MAK32YCR019W 1092 nt8.75□□□□□ -1.01
TY1A-LR1P0CX68 YDR524W-CYDR524W-C 90 nt8.75□□□□□ -1.01
TY1A-LR1P0CX68 YGL235WYGL235W 537 nt8.75□□□□□ -1.01
TY1A-LR1P0CX68 MRPL15YLR312W-A 762 nt8.75□□□□□ -1.01
TY1A-LR1P0CX68 HDA1YNL021W 2121 nt8.74□□□□□ -1.01
TY1A-LR1P0CX68 YCR006CYCR006C 474 nt8.74□□□□□ -1.01
TY1A-LR1P0CX68 INM1YHR046C 888 nt8.74□□□□□ -1.01
TY1A-LR1P0CX68 ERP5YHR110W 639 nt8.74□□□□□ -1.01
TY1A-LR1P0CX68 WSS1YHR134W 810 nt8.74□□□□□ -1.01
TY1A-LR1P0CX68 SPO12YHR152W 522 nt8.74□□□□□ -1.01
TY1A-LR1P0CX68 YML094C-AYML094C-A 402 nt8.74□□□□□ -1.01
TY1A-LR1P0CX68 YNL217WYNL217W 981 nt8.74□□□□□ -1.01
TY1A-LR1P0CX68 BUD21YOR078W 645 nt8.74□□□□□ -1.01
TY1A-LR1P0CX68 INA1YLR413W 2028 nt8.73□□□□□ -1.01
TY1A-LR1P0CX68 TVP23YDR084C 600 nt8.73□□□□□ -1.01
TY1A-LR1P0CX68 MTQ2YDR140W 666 nt8.73□□□□□ -1.01
TY1A-LR1P0CX68 HIM1YDR317W 1245 nt8.73□□□□□ -1.01
TY1A-LR1P0CX68 IRC9YJL142C 393 nt8.73□□□□□ -1.01
TY1A-LR1P0CX68 YAL064WYAL064W 285 nt8.73□□□□□ -1.01
TY1A-LR1P0CX68 YBR027CYBR027C 333 nt8.73□□□□□ -1.01
TY1A-LR1P0CX68 HHO1YPL127C 777 nt8.73□□□□□ -1.01
TY1A-LR1P0CX68 GPI16YHR188C 1833 nt8.73□□□□□ -1.01
TY1A-LR1P0CX68 tR(ACG)Q2tR(ACG)Q2 74 nt8.72□□□□□ -1.01
TY1A-LR1P0CX68 MRPL49YJL096W 486 nt8.72□□□□□ -1.01
TY1A-LR1P0CX68 MRP7YNL005C 1116 nt8.72□□□□□ -1.01
TY1A-LR1P0CX68 YDR336WYDR336W 945 nt8.71□□□□□ -1.02
TY1A-LR1P0CX68 YML090WYML090W 387 nt8.71□□□□□ -1.02
TY1A-LR1P0CX68 MTQ1YNL063W 945 nt8.71□□□□□ -1.02
TY1A-LR1P0CX68 HRT1YOL133W 366 nt8.71□□□□□ -1.02
TY1A-LR1P0CX68 TFB6YOR352W 1032 nt8.71□□□□□ -1.02
TY1A-LR1P0CX68 CLD1YGR110W 1338 nt8.71□□□□□ -1.02
TY1A-LR1P0CX68 GDH3YAL062W 1374 nt8.71□□□□□ -1.02
TY1A-LR1P0CX68 SAY1YGR263C 1275 nt8.7□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 48.8 ms