Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV34A0A0B4J273 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV34A0A0B4J273 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRAV34A0A0B4J273 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV34A0A0B4J273 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV34A0A0B4J273 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRAV34A0A0B4J273 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV34A0A0B4J273 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV34A0A0B4J273 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV34A0A0B4J273 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRAV34A0A0B4J273 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV34A0A0B4J273 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV34A0A0B4J273 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TRAV34A0A0B4J273 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAV34A0A0B4J273 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV34A0A0B4J273 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV34A0A0B4J273 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.58■□□□□ 0.72
TRAV34A0A0B4J273 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV34A0A0B4J273 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV34A0A0B4J273 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV34A0A0B4J273 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV34A0A0B4J273 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.57■□□□□ 0.72
TRAV34A0A0B4J273 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV34A0A0B4J273 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV34A0A0B4J273 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRAV34A0A0B4J273 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV34A0A0B4J273 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRAV34A0A0B4J273 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV34A0A0B4J273 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV34A0A0B4J273 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV34A0A0B4J273 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV34A0A0B4J273 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV34A0A0B4J273 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV34A0A0B4J273 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRAV34A0A0B4J273 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV34A0A0B4J273 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRAV34A0A0B4J273 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV34A0A0B4J273 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
TRAV34A0A0B4J273 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV34A0A0B4J273 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV34A0A0B4J273 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV34A0A0B4J273 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV34A0A0B4J273 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV34A0A0B4J273 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV34A0A0B4J273 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV34A0A0B4J273 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.52■□□□□ 0.72
TRAV34A0A0B4J273 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV34A0A0B4J273 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRAV34A0A0B4J273 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV34A0A0B4J273 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.52■□□□□ 0.71
TRAV34A0A0B4J273 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV34A0A0B4J273 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV34A0A0B4J273 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV34A0A0B4J273 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV34A0A0B4J273 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV34A0A0B4J273 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV34A0A0B4J273 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV34A0A0B4J273 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV34A0A0B4J273 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV34A0A0B4J273 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TRAV34A0A0B4J273 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV34A0A0B4J273 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV34A0A0B4J273 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV34A0A0B4J273 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV34A0A0B4J273 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAV34A0A0B4J273 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV34A0A0B4J273 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV34A0A0B4J273 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV34A0A0B4J273 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV34A0A0B4J273 AL449106.1-201ENST00000608517 1980 ntBASIC19.49■□□□□ 0.71
TRAV34A0A0B4J273 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV34A0A0B4J273 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV34A0A0B4J273 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TRAV34A0A0B4J273 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV34A0A0B4J273 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV34A0A0B4J273 AP002365.1-201ENST00000603448 772 ntBASIC19.48■□□□□ 0.71
TRAV34A0A0B4J273 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV34A0A0B4J273 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV34A0A0B4J273 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV34A0A0B4J273 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV34A0A0B4J273 LINC01003-201ENST00000564834 1764 ntBASIC19.47■□□□□ 0.71
TRAV34A0A0B4J273 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV34A0A0B4J273 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV34A0A0B4J273 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV34A0A0B4J273 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV34A0A0B4J273 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV34A0A0B4J273 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRAV34A0A0B4J273 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRAV34A0A0B4J273 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV34A0A0B4J273 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV34A0A0B4J273 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV34A0A0B4J273 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV34A0A0B4J273 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV34A0A0B4J273 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.44■□□□□ 0.7
TRAV34A0A0B4J273 AL133380.1-201ENST00000506013 324 ntBASIC19.44■□□□□ 0.7
TRAV34A0A0B4J273 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRAV34A0A0B4J273 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.44■□□□□ 0.7
TRAV34A0A0B4J273 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV34A0A0B4J273 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRAV34A0A0B4J273 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms