Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 MFAP1P1-201ENST00000442257 1255 ntBASIC21.48■■□□□ 1.03
COL1A2P08123 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.48■■□□□ 1.03
COL1A2P08123 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.48■■□□□ 1.03
COL1A2P08123 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.48■■□□□ 1.03
COL1A2P08123 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.48■■□□□ 1.03
COL1A2P08123 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.48■■□□□ 1.03
COL1A2P08123 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.48■■□□□ 1.03
COL1A2P08123 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A2P08123 AC010331.1-201ENST00000611423 582 ntBASIC21.48■■□□□ 1.03
COL1A2P08123 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
COL1A2P08123 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A2P08123 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.48■■□□□ 1.03
COL1A2P08123 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A2P08123 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
COL1A2P08123 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A2P08123 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.48■■□□□ 1.03
COL1A2P08123 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.48■■□□□ 1.03
COL1A2P08123 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A2P08123 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A2P08123 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.48■■□□□ 1.03
COL1A2P08123 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A2P08123 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
COL1A2P08123 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.48■■□□□ 1.03
COL1A2P08123 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.48■■□□□ 1.03
COL1A2P08123 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.48■■□□□ 1.03
COL1A2P08123 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.48■■□□□ 1.03
COL1A2P08123 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.48■■□□□ 1.03
COL1A2P08123 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
COL1A2P08123 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.48■■□□□ 1.03
COL1A2P08123 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL1A2P08123 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL1A2P08123 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL1A2P08123 AC092667.1-201ENST00000434301 2586 ntBASIC21.47■■□□□ 1.03
COL1A2P08123 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
COL1A2P08123 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
COL1A2P08123 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL1A2P08123 AC005521.1-201ENST00000393351 872 ntBASIC21.47■■□□□ 1.03
COL1A2P08123 AC128688.1-201ENST00000487626 519 ntBASIC21.47■■□□□ 1.03
COL1A2P08123 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL1A2P08123 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL1A2P08123 TCF3P1-201ENST00000423021 1937 ntBASIC21.47■■□□□ 1.03
COL1A2P08123 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COL1A2P08123 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A2P08123 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A2P08123 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A2P08123 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
COL1A2P08123 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
COL1A2P08123 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A2P08123 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A2P08123 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
COL1A2P08123 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A2P08123 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A2P08123 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.46■■□□□ 1.03
COL1A2P08123 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A2P08123 TERF1P1-201ENST00000311003 1181 ntBASIC21.46■■□□□ 1.03
COL1A2P08123 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
COL1A2P08123 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A2P08123 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
COL1A2P08123 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
COL1A2P08123 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.45■■□□□ 1.02
COL1A2P08123 AL391422.3-201ENST00000603791 2761 ntBASIC21.45■■□□□ 1.02
COL1A2P08123 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL1A2P08123 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.45■■□□□ 1.02
COL1A2P08123 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL1A2P08123 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.45■■□□□ 1.02
COL1A2P08123 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.45■■□□□ 1.02
COL1A2P08123 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.45■■□□□ 1.02
COL1A2P08123 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.45■■□□□ 1.02
COL1A2P08123 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.45■■□□□ 1.02
COL1A2P08123 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
COL1A2P08123 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.45■■□□□ 1.02
COL1A2P08123 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.45■■□□□ 1.02
COL1A2P08123 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.45■■□□□ 1.02
COL1A2P08123 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.44■■□□□ 1.02
COL1A2P08123 KRT8P41-201ENST00000533985 1514 ntBASIC21.44■■□□□ 1.02
COL1A2P08123 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL1A2P08123 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.44■■□□□ 1.02
COL1A2P08123 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL1A2P08123 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
COL1A2P08123 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.44■■□□□ 1.02
COL1A2P08123 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL1A2P08123 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL1A2P08123 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL1A2P08123 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.44■■□□□ 1.02
COL1A2P08123 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL1A2P08123 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.44■■□□□ 1.02
COL1A2P08123 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL1A2P08123 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.44■■□□□ 1.02
COL1A2P08123 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL1A2P08123 AC073508.3-201ENST00000619697 1419 ntBASIC21.44■■□□□ 1.02
COL1A2P08123 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.44■■□□□ 1.02
COL1A2P08123 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL1A2P08123 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL1A2P08123 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
COL1A2P08123 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.43■■□□□ 1.02
COL1A2P08123 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL1A2P08123 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL1A2P08123 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
COL1A2P08123 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL1A2P08123 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms