Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 HYI-206ENST00000372434 1025 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM56-RWDD3S4R434 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 KRT19P1-201ENST00000405746 1186 ntBASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 TERF1P5-201ENST00000477545 1207 ntBASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 UBE2DNL-204ENST00000602536 740 ntBASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 MYCNOS-205ENST00000641950 531 ntBASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 LETM1P2-201ENST00000597330 2178 ntBASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM56-RWDD3S4R434 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 AC100791.3-201ENST00000617619 330 ntBASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TMEM56-RWDD3S4R434 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 AC006333.2-201ENST00000607957 2099 ntBASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TMEM56-RWDD3S4R434 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 AC026471.1-201ENST00000564629 3026 ntBASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEM56-RWDD3S4R434 KRT18P14-201ENST00000534205 1250 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms