Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
BEST4Q8NFU0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
BEST4Q8NFU0 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 AL358852.1-201ENST00000623174 1268 ntBASIC16.91■□□□□ 0.3
BEST4Q8NFU0 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BEST4Q8NFU0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 FAM21FP-204ENST00000608637 956 ntBASIC16.9■□□□□ 0.3
BEST4Q8NFU0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
BEST4Q8NFU0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.89■□□□□ 0.3
BEST4Q8NFU0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BEST4Q8NFU0 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BEST4Q8NFU0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
BEST4Q8NFU0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.89■□□□□ 0.3
BEST4Q8NFU0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
BEST4Q8NFU0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 SLC7A5P2-201ENST00000553010 536 ntBASIC16.89■□□□□ 0.29
BEST4Q8NFU0 DUX4L2-201ENST00000561772 1275 ntBASIC16.89■□□□□ 0.29
BEST4Q8NFU0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 DUX4L6-201ENST00000626483 1275 ntBASIC16.89■□□□□ 0.29
BEST4Q8NFU0 DUX4L1-201ENST00000627662 1275 ntBASIC16.89■□□□□ 0.29
BEST4Q8NFU0 DUX4L8-201ENST00000629013 1275 ntBASIC16.89■□□□□ 0.29
BEST4Q8NFU0 DUX4L3-201ENST00000630187 1275 ntBASIC16.89■□□□□ 0.29
BEST4Q8NFU0 DUX4L7-201ENST00000630678 1275 ntBASIC16.89■□□□□ 0.29
BEST4Q8NFU0 DUX4L5-201ENST00000630834 1275 ntBASIC16.89■□□□□ 0.29
BEST4Q8NFU0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BEST4Q8NFU0 AP000997.3-201ENST00000623333 2250 ntBASIC16.89■□□□□ 0.29
BEST4Q8NFU0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms