Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 AC124283.5-201ENST00000624661 1809 ntBASIC17.19■□□□□ 0.34
CDH20Q9HBT6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDH20Q9HBT6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.18■□□□□ 0.34
CDH20Q9HBT6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDH20Q9HBT6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 KRT18P29-201ENST00000397031 1267 ntBASIC17.17■□□□□ 0.34
CDH20Q9HBT6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDH20Q9HBT6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 AC069544.1-201ENST00000609399 999 ntBASIC17.16■□□□□ 0.34
CDH20Q9HBT6 AL121829.2-201ENST00000620908 328 ntBASIC17.16■□□□□ 0.34
CDH20Q9HBT6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH20Q9HBT6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms