Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.74■□□□□ 0.75
LDB2O43679 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB2O43679 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.74■□□□□ 0.75
LDB2O43679 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB2O43679 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LDB2O43679 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.74■□□□□ 0.75
LDB2O43679 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LDB2O43679 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.74■□□□□ 0.75
LDB2O43679 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LDB2O43679 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB2O43679 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LDB2O43679 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB2O43679 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.73■□□□□ 0.75
LDB2O43679 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB2O43679 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.73■□□□□ 0.75
LDB2O43679 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
LDB2O43679 RNA5SP413-201ENST00000516373 109 ntBASIC19.73■□□□□ 0.75
LDB2O43679 CD99P1-205ENST00000527459 561 ntBASIC19.73■□□□□ 0.75
LDB2O43679 KRT18P6-201ENST00000555540 1265 ntBASIC19.73■□□□□ 0.75
LDB2O43679 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.73■□□□□ 0.75
LDB2O43679 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.73■□□□□ 0.75
LDB2O43679 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.73■□□□□ 0.75
LDB2O43679 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.73■□□□□ 0.75
LDB2O43679 AC008403.3-201ENST00000598924 454 ntBASIC19.73■□□□□ 0.75
LDB2O43679 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LDB2O43679 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB2O43679 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
LDB2O43679 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.73■□□□□ 0.75
LDB2O43679 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LDB2O43679 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.73■□□□□ 0.75
LDB2O43679 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LDB2O43679 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB2O43679 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB2O43679 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LDB2O43679 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB2O43679 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB2O43679 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB2O43679 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB2O43679 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB2O43679 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDB2O43679 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.72■□□□□ 0.75
LDB2O43679 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.72■□□□□ 0.75
LDB2O43679 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDB2O43679 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LDB2O43679 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LDB2O43679 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.72■□□□□ 0.75
LDB2O43679 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LDB2O43679 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
LDB2O43679 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.72■□□□□ 0.75
LDB2O43679 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LDB2O43679 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB2O43679 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB2O43679 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDB2O43679 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.71■□□□□ 0.75
LDB2O43679 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.71■□□□□ 0.75
LDB2O43679 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.71■□□□□ 0.75
LDB2O43679 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB2O43679 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB2O43679 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB2O43679 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDB2O43679 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDB2O43679 AL121906.2-201ENST00000621597 723 ntBASIC19.71■□□□□ 0.75
LDB2O43679 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.71■□□□□ 0.75
LDB2O43679 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LDB2O43679 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB2O43679 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LDB2O43679 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
LDB2O43679 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LDB2O43679 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LDB2O43679 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.7■□□□□ 0.74
LDB2O43679 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LDB2O43679 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.7■□□□□ 0.74
LDB2O43679 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.7■□□□□ 0.74
LDB2O43679 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.7■□□□□ 0.74
LDB2O43679 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.7■□□□□ 0.74
LDB2O43679 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.7■□□□□ 0.74
LDB2O43679 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
LDB2O43679 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.7■□□□□ 0.74
LDB2O43679 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.7■□□□□ 0.74
LDB2O43679 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.7■□□□□ 0.74
LDB2O43679 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.7■□□□□ 0.74
LDB2O43679 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LDB2O43679 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LDB2O43679 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms