Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KRT78Q8N1N4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.05■□□□□ 0.64
KRT78Q8N1N4 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT78Q8N1N4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.04■□□□□ 0.64
KRT78Q8N1N4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 HCG11-201ENST00000411553 5696 ntBASIC19.04■□□□□ 0.64
KRT78Q8N1N4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT78Q8N1N4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT78Q8N1N4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms