Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFX6Q8HWS3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.58■□□□□ 0.88
RFX6Q8HWS3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 GPX1P1-201ENST00000388829 606 ntBASIC20.57■□□□□ 0.88
RFX6Q8HWS3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFX6Q8HWS3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.56■□□□□ 0.88
RFX6Q8HWS3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 AL121832.2-201ENST00000610979 668 ntBASIC20.56■□□□□ 0.88
RFX6Q8HWS3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.56■□□□□ 0.88
RFX6Q8HWS3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 AC083906.2-201ENST00000511578 360 ntBASIC20.55■□□□□ 0.88
RFX6Q8HWS3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFX6Q8HWS3 AC116562.4-201ENST00000641316 2276 ntBASIC20.55■□□□□ 0.88
RFX6Q8HWS3 TREX1-205ENST00000625293 1783 ntBASIC20.54■□□□□ 0.88
RFX6Q8HWS3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX6Q8HWS3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.54■□□□□ 0.88
RFX6Q8HWS3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX6Q8HWS3 PHGDH-210ENST00000641115 1638 ntBASIC20.54■□□□□ 0.88
RFX6Q8HWS3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX6Q8HWS3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX6Q8HWS3 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.54■□□□□ 0.88
RFX6Q8HWS3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX6Q8HWS3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFX6Q8HWS3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RFX6Q8HWS3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.54■□□□□ 0.88
RFX6Q8HWS3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.54■□□□□ 0.88
RFX6Q8HWS3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.54■□□□□ 0.88
RFX6Q8HWS3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms