Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 BX276092.2-201ENST00000417668 665 ntBASIC20.62■□□□□ 0.89
RFX6Q8HWS3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 RAP2CP1-201ENST00000605103 478 ntBASIC20.62■□□□□ 0.89
RFX6Q8HWS3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RFX6Q8HWS3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 CROCCP5-201ENST00000436658 830 ntBASIC20.61■□□□□ 0.89
RFX6Q8HWS3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFX6Q8HWS3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFX6Q8HWS3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 AC007952.6-201ENST00000573168 2673 ntBASIC20.59■□□□□ 0.89
RFX6Q8HWS3 AC003957.1-201ENST00000625108 2673 ntBASIC20.59■□□□□ 0.89
RFX6Q8HWS3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 AC006970.2-201ENST00000450065 779 ntBASIC20.59■□□□□ 0.89
RFX6Q8HWS3 AC023632.3-201ENST00000521633 145 ntBASIC20.59■□□□□ 0.89
RFX6Q8HWS3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 AC009237.14-201ENST00000609975 1594 ntBASIC20.59■□□□□ 0.89
RFX6Q8HWS3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.59■□□□□ 0.89
RFX6Q8HWS3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.58■□□□□ 0.89
RFX6Q8HWS3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFX6Q8HWS3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms