Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.37■□□□□ 0.37
CDH20Q9HBT6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDH20Q9HBT6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 PTBP1P-201ENST00000554374 1601 ntBASIC17.36■□□□□ 0.37
CDH20Q9HBT6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 CD99P1-205ENST00000527459 561 ntBASIC17.36■□□□□ 0.37
CDH20Q9HBT6 AC005829.2-201ENST00000571422 1056 ntBASIC17.36■□□□□ 0.37
CDH20Q9HBT6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 KRT16P6-202ENST00000425692 1426 ntBASIC17.36■□□□□ 0.37
CDH20Q9HBT6 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.36■□□□□ 0.37
CDH20Q9HBT6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 LINC01521-201ENST00000504184 1943 ntBASIC17.35■□□□□ 0.37
CDH20Q9HBT6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDH20Q9HBT6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.34■□□□□ 0.37
CDH20Q9HBT6 AC006557.6-201ENST00000623071 864 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms