Protein–RNA interactions for Protein: P11940

PABPC1, Polyadenylate-binding protein 1, humanhuman

Known RBP Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11940 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PABPC1P11940 AC012618.2-201ENST00000428058 849 ntBASIC20.36■□□□□ 0.85
PABPC1P11940 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.36■□□□□ 0.85
PABPC1P11940 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PABPC1P11940 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.36■□□□□ 0.85
PABPC1P11940 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.36■□□□□ 0.85
PABPC1P11940 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.36■□□□□ 0.85
PABPC1P11940 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PABPC1P11940 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.36■□□□□ 0.85
PABPC1P11940 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PABPC1P11940 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.36■□□□□ 0.85
PABPC1P11940 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PABPC1P11940 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.36■□□□□ 0.85
PABPC1P11940 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PABPC1P11940 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PABPC1P11940 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PABPC1P11940 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
PABPC1P11940 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.35■□□□□ 0.85
PABPC1P11940 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.35■□□□□ 0.85
PABPC1P11940 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.35■□□□□ 0.85
PABPC1P11940 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PABPC1P11940 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PABPC1P11940 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PABPC1P11940 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PABPC1P11940 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.35■□□□□ 0.85
PABPC1P11940 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PABPC1P11940 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
PABPC1P11940 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PABPC1P11940 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.35■□□□□ 0.85
PABPC1P11940 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.35■□□□□ 0.85
PABPC1P11940 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.35■□□□□ 0.85
PABPC1P11940 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.35■□□□□ 0.85
PABPC1P11940 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PABPC1P11940 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PABPC1P11940 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PABPC1P11940 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PABPC1P11940 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.35■□□□□ 0.85
PABPC1P11940 NBPF21P-201ENST00000425093 1451 ntBASIC20.35■□□□□ 0.85
PABPC1P11940 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.35■□□□□ 0.85
PABPC1P11940 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.34■□□□□ 0.85
PABPC1P11940 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PABPC1P11940 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.34■□□□□ 0.85
PABPC1P11940 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
PABPC1P11940 RPS2P55-201ENST00000397318 883 ntBASIC20.34■□□□□ 0.85
PABPC1P11940 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PABPC1P11940 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
PABPC1P11940 AC107956.1-201ENST00000494359 873 ntBASIC20.34■□□□□ 0.85
PABPC1P11940 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.34■□□□□ 0.85
PABPC1P11940 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.34■□□□□ 0.85
PABPC1P11940 AC233702.5-201ENST00000584107 538 ntBASIC20.34■□□□□ 0.85
PABPC1P11940 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.34■□□□□ 0.85
PABPC1P11940 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
PABPC1P11940 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PABPC1P11940 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PABPC1P11940 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PABPC1P11940 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.33■□□□□ 0.85
PABPC1P11940 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.33■□□□□ 0.85
PABPC1P11940 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
PABPC1P11940 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PABPC1P11940 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PABPC1P11940 RARRES2P10-201ENST00000564312 460 ntBASIC20.33■□□□□ 0.85
PABPC1P11940 MIR4497-201ENST00000583208 89 ntBASIC20.33■□□□□ 0.85
PABPC1P11940 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.33■□□□□ 0.85
PABPC1P11940 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PABPC1P11940 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PABPC1P11940 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PABPC1P11940 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.33■□□□□ 0.84
PABPC1P11940 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PABPC1P11940 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PABPC1P11940 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PABPC1P11940 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PABPC1P11940 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms