Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC30.06■■■□□ 2.4
AFAP1Q8N556 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
AFAP1Q8N556 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
AFAP1Q8N556 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
AFAP1Q8N556 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
AFAP1Q8N556 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
AFAP1Q8N556 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC30.05■■■□□ 2.4
AFAP1Q8N556 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
AFAP1Q8N556 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
AFAP1Q8N556 STK25-204ENST00000405585 1643 ntTSL 2 BASIC30.05■■■□□ 2.4
AFAP1Q8N556 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC30.05■■■□□ 2.4
AFAP1Q8N556 CLN6-204ENST00000564752 900 ntTSL 3 BASIC30.05■■■□□ 2.4
AFAP1Q8N556 AC139887.4-201ENST00000607877 719 ntBASIC30.05■■■□□ 2.4
AFAP1Q8N556 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
AFAP1Q8N556 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC30.05■■■□□ 2.4
AFAP1Q8N556 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
AFAP1Q8N556 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC30.04■■■□□ 2.4
AFAP1Q8N556 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
AFAP1Q8N556 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
AFAP1Q8N556 AP006587.1-201ENST00000534129 1502 ntBASIC30.04■■■□□ 2.4
AFAP1Q8N556 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
AFAP1Q8N556 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC30.04■■■□□ 2.4
AFAP1Q8N556 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC30.03■■■□□ 2.4
AFAP1Q8N556 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
AFAP1Q8N556 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
AFAP1Q8N556 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
AFAP1Q8N556 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
AFAP1Q8N556 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
AFAP1Q8N556 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
AFAP1Q8N556 SAPCD2P2-201ENST00000431719 1174 ntBASIC30.03■■■□□ 2.4
AFAP1Q8N556 AC128688.1-201ENST00000487626 519 ntBASIC30.03■■■□□ 2.4
AFAP1Q8N556 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
AFAP1Q8N556 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
AFAP1Q8N556 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC30.03■■■□□ 2.4
AFAP1Q8N556 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
AFAP1Q8N556 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
AFAP1Q8N556 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
AFAP1Q8N556 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
AFAP1Q8N556 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC30.02■■■□□ 2.4
AFAP1Q8N556 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC30.02■■■□□ 2.4
AFAP1Q8N556 COPE-203ENST00000351079 907 ntTSL 2 BASIC30.02■■■□□ 2.4
AFAP1Q8N556 AC008040.2-201ENST00000461049 708 ntBASIC30.02■■■□□ 2.4
AFAP1Q8N556 KRT18P56-201ENST00000507275 550 ntBASIC30.02■■■□□ 2.4
AFAP1Q8N556 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
AFAP1Q8N556 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
AFAP1Q8N556 AC130371.2-201ENST00000619443 611 ntBASIC30.02■■■□□ 2.4
AFAP1Q8N556 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
AFAP1Q8N556 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
AFAP1Q8N556 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
AFAP1Q8N556 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC30.01■■■□□ 2.4
AFAP1Q8N556 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.4
AFAP1Q8N556 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC30.01■■■□□ 2.39
AFAP1Q8N556 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC30.01■■■□□ 2.39
AFAP1Q8N556 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC30.01■■■□□ 2.39
AFAP1Q8N556 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC30.01■■■□□ 2.39
AFAP1Q8N556 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
AFAP1Q8N556 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC30.01■■■□□ 2.39
AFAP1Q8N556 AL121603.2-201ENST00000557373 2117 ntBASIC30.01■■■□□ 2.39
AFAP1Q8N556 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC30.01■■■□□ 2.39
AFAP1Q8N556 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC30■■■□□ 2.39
AFAP1Q8N556 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
AFAP1Q8N556 KRT8P17-201ENST00000453110 1448 ntBASIC30■■■□□ 2.39
AFAP1Q8N556 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
AFAP1Q8N556 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
AFAP1Q8N556 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC30■■■□□ 2.39
AFAP1Q8N556 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC30■■■□□ 2.39
AFAP1Q8N556 KRT126P-201ENST00000549467 1181 ntBASIC30■■■□□ 2.39
AFAP1Q8N556 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC30■■■□□ 2.39
AFAP1Q8N556 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC30■■■□□ 2.39
AFAP1Q8N556 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
AFAP1Q8N556 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
AFAP1Q8N556 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
AFAP1Q8N556 MED25-212ENST00000618715 1467 ntTSL 5 BASIC29.99■■■□□ 2.39
AFAP1Q8N556 AC233723.2-201ENST00000623798 2106 ntBASIC29.99■■■□□ 2.39
AFAP1Q8N556 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
AFAP1Q8N556 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
AFAP1Q8N556 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
AFAP1Q8N556 COPS8-203ENST00000409334 794 ntTSL 5 BASIC29.99■■■□□ 2.39
AFAP1Q8N556 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
AFAP1Q8N556 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC29.99■■■□□ 2.39
AFAP1Q8N556 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC29.99■■■□□ 2.39
AFAP1Q8N556 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC29.99■■■□□ 2.39
AFAP1Q8N556 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
AFAP1Q8N556 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
AFAP1Q8N556 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
AFAP1Q8N556 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC29.98■■■□□ 2.39
AFAP1Q8N556 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC29.98■■■□□ 2.39
AFAP1Q8N556 RNF152P1-201ENST00000397754 604 ntBASIC29.98■■■□□ 2.39
AFAP1Q8N556 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
AFAP1Q8N556 AP000692.2-201ENST00000608391 879 ntBASIC29.98■■■□□ 2.39
AFAP1Q8N556 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
AFAP1Q8N556 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
AFAP1Q8N556 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC29.97■■■□□ 2.39
AFAP1Q8N556 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
AFAP1Q8N556 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC29.97■■■□□ 2.39
AFAP1Q8N556 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC29.97■■■□□ 2.39
AFAP1Q8N556 AC121338.2-201ENST00000622535 1744 ntBASIC29.97■■■□□ 2.39
AFAP1Q8N556 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC29.97■■■□□ 2.39
AFAP1Q8N556 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC29.97■■■□□ 2.39
AFAP1Q8N556 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms