Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 AC124016.1-201ENST00000609552 612 ntBASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNAP47Q5SQN1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.36■□□□□ 0.69
SNAP47Q5SQN1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 PLK5-205ENST00000642079 1969 ntBASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 AC124283.5-201ENST00000624661 1809 ntBASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 PRKY-204ENST00000533551 1019 ntBASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
SNAP47Q5SQN1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNAP47Q5SQN1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNAP47Q5SQN1 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.33■□□□□ 0.69
SNAP47Q5SQN1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNAP47Q5SQN1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 MIR4497-201ENST00000583208 89 ntBASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 AC110285.5-201ENST00000611501 352 ntBASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 FP700111.2-201ENST00000619190 1892 ntBASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNAP47Q5SQN1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNAP47Q5SQN1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms