Protein–RNA interactions for Protein: Q08773

ISW2, ISWI chromatin-remodeling complex ATPase ISW2, yeastyeast

Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ISW2Q08773 snR77snR77 88 nt2.6□□□□□ -1.99
ISW2Q08773 MON2YNL297C 4911 nt2.59□□□□□ -1.99
ISW2Q08773 NUP188YML103C 4968 nt2.58□□□□□ -2
ISW2Q08773 PMD1YER132C 5262 nt2.56□□□□□ -2
ISW2Q08773 SPT7YBR081C 3999 nt2.55□□□□□ -2
ISW2Q08773 USO1YDL058W 5373 nt2.52□□□□□ -2.01
ISW2Q08773 SEC16YPL085W 6588 nt2.51□□□□□ -2.01
ISW2Q08773 VAM6YDL077C 3150 nt2.5□□□□□ -2.01
ISW2Q08773 SOV1YMR066W 2697 nt2.5□□□□□ -2.01
ISW2Q08773 YGR130CYGR130C 2451 nt2.48□□□□□ -2.01
ISW2Q08773 BNI1YNL271C 5862 nt2.47□□□□□ -2.01
ISW2Q08773 YMR045CYMR045C 5268 nt2.46□□□□□ -2.02
ISW2Q08773 YOR316C-AYOR316C-A 210 nt2.46□□□□□ -2.02
ISW2Q08773 YPR117WYPR117W 7470 nt2.45□□□□□ -2.02
ISW2Q08773 BST1YFL025C 3090 nt2.45□□□□□ -2.02
ISW2Q08773 CSF1YLR087C 8877 nt2.42□□□□□ -2.02
ISW2Q08773 SPP41YDR464W 4308 nt2.4□□□□□ -2.03
ISW2Q08773 TOR2YKL203C 7425 nt2.38□□□□□ -2.03
ISW2Q08773 MYO1YHR023W 5787 nt2.37□□□□□ -2.03
ISW2Q08773 PEP1YBL017C 4740 nt2.37□□□□□ -2.03
ISW2Q08773 SSK2YNR031C 4740 nt2.36□□□□□ -2.03
ISW2Q08773 CFT1YDR301W 4074 nt2.32□□□□□ -2.04
ISW2Q08773 SBH2YER019C-A 267 nt2.3□□□□□ -2.04
ISW2Q08773 FKS1YLR342W 5631 nt2.25□□□□□ -2.05
ISW2Q08773 YHR214C-BYHR214C-B 5382 nt2.24□□□□□ -2.05
ISW2Q08773 FAB1YFR019W 6837 nt2.22□□□□□ -2.05
ISW2Q08773 TMA7YLR262C-A 195 nt2.21□□□□□ -2.06
ISW2Q08773 YOR093CYOR093C 4947 nt2.2□□□□□ -2.06
ISW2Q08773 YOR192C-BYOR192C-B 5313 nt2.2□□□□□ -2.06
ISW2Q08773 YMR272W-BYMR272W-B 108 nt2.11□□□□□ -2.07
ISW2Q08773 DNF3YMR162C 4971 nt2.06□□□□□ -2.08
ISW2Q08773 BRR2YER172C 6492 nt2.04□□□□□ -2.08
ISW2Q08773 tC(GCA)QtC(GCA)Q 76 nt2.03□□□□□ -2.08
ISW2Q08773 FIG2YCR089W 4830 nt1.98□□□□□ -2.09
ISW2Q08773 RKR1YMR247C 4689 nt1.97□□□□□ -2.09
ISW2Q08773 VPS15YBR097W 4365 nt1.97□□□□□ -2.09
ISW2Q08773 YBL100W-BYBL100W-B 5313 nt1.96□□□□□ -2.1
ISW2Q08773 BUD3YCL014W 4911 nt1.93□□□□□ -2.1
ISW2Q08773 YML100W-AYML100W-A 174 nt1.92□□□□□ -2.1
ISW2Q08773 MEC1YBR136W 7107 nt1.9□□□□□ -2.11
ISW2Q08773 LTE1YAL024C 4308 nt1.86□□□□□ -2.11
ISW2Q08773 tQ(UUG)E2tQ(UUG)E2 72 nt1.84□□□□□ -2.11
ISW2Q08773 YMR247W-AYMR247W-A 144 nt1.82□□□□□ -2.12
ISW2Q08773 IRA1YBR140C 9279 nt1.81□□□□□ -2.12
ISW2Q08773 PAU24YBR301W 363 nt1.81□□□□□ -2.12
ISW2Q08773 YJR029WYJR029W 5268 nt1.8□□□□□ -2.12
ISW2Q08773 tT(UGU)HtT(UGU)H 72 nt1.8□□□□□ -2.12
ISW2Q08773 YJL113WYJL113W 4647 nt1.76□□□□□ -2.13
ISW2Q08773 RPL41BYDL133C-A 78 nt1.74□□□□□ -2.13
ISW2Q08773 YOL014WYOL014W 375 nt1.72□□□□□ -2.13
ISW2Q08773 CCH1YGR217W 6120 nt1.7□□□□□ -2.14
ISW2Q08773 YPR137C-BYPR137C-B 5268 nt1.68□□□□□ -2.14
ISW2Q08773 SCC2YDR180W 4482 nt1.68□□□□□ -2.14
ISW2Q08773 ESP1YGR098C 4893 nt1.67□□□□□ -2.14
ISW2Q08773 HKR1YDR420W 5409 nt1.64□□□□□ -2.15
ISW2Q08773 YKL145W-AYKL145W-A 93 nt1.64□□□□□ -2.15
ISW2Q08773 tH(GUG)E1tH(GUG)E1 72 nt1.56□□□□□ -2.16
ISW2Q08773 tH(GUG)E2tH(GUG)E2 72 nt1.56□□□□□ -2.16
ISW2Q08773 tH(GUG)G1tH(GUG)G1 72 nt1.56□□□□□ -2.16
ISW2Q08773 tH(GUG)G2tH(GUG)G2 72 nt1.56□□□□□ -2.16
ISW2Q08773 tH(GUG)HtH(GUG)H 72 nt1.56□□□□□ -2.16
ISW2Q08773 tH(GUG)KtH(GUG)K 72 nt1.56□□□□□ -2.16
ISW2Q08773 tH(GUG)MtH(GUG)M 72 nt1.56□□□□□ -2.16
ISW2Q08773 YOR335W-AYOR335W-A 81 nt1.56□□□□□ -2.16
ISW2Q08773 THO2YNL139C 4794 nt1.56□□□□□ -2.16
ISW2Q08773 DOP1YDR141C 5097 nt1.54□□□□□ -2.16
ISW2Q08773 FMP27YLR454W 7887 nt1.54□□□□□ -2.16
ISW2Q08773 MLP1YKR095W 5628 nt1.5□□□□□ -2.17
ISW2Q08773 BEM2YER155C 6504 nt1.49□□□□□ -2.17
ISW2Q08773 snR58snR58 96 nt1.49□□□□□ -2.17
ISW2Q08773 snR6snR6 112 nt1.49□□□□□ -2.17
ISW2Q08773 YOR186C-AYOR186C-A 210 nt1.46□□□□□ -2.18
ISW2Q08773 IML1YJR138W 4755 nt1.46□□□□□ -2.18
ISW2Q08773 tV(UAC)BtV(UAC)B 74 nt1.4□□□□□ -2.19
ISW2Q08773 tV(UAC)DtV(UAC)D 74 nt1.4□□□□□ -2.19
ISW2Q08773 IQG1YPL242C 4488 nt1.35□□□□□ -2.19
ISW2Q08773 PAU9YBL108C-A 129 nt1.34□□□□□ -2.19
ISW2Q08773 YMR272W-AYMR272W-A 114 nt1.25□□□□□ -2.21
ISW2Q08773 snR73snR73 106 nt1.21□□□□□ -2.22
ISW2Q08773 EMT1tM(CAU)D 73 nt1.11□□□□□ -2.23
ISW2Q08773 EMT5tM(CAU)J1 73 nt1.11□□□□□ -2.23
ISW2Q08773 EMT3tM(CAU)J2 73 nt1.11□□□□□ -2.23
ISW2Q08773 EMT4tM(CAU)M 73 nt1.11□□□□□ -2.23
ISW2Q08773 EMT2tM(CAU)O2 73 nt1.11□□□□□ -2.23
ISW2Q08773 snR161snR161 161 nt1.07□□□□□ -2.24
ISW2Q08773 tF(GAA)BtF(GAA)B 73 nt1.03□□□□□ -2.24
ISW2Q08773 tF(GAA)FtF(GAA)F 73 nt1.03□□□□□ -2.24
ISW2Q08773 tF(GAA)GtF(GAA)G 73 nt1.03□□□□□ -2.24
ISW2Q08773 tF(GAA)H1tF(GAA)H1 73 nt1.03□□□□□ -2.24
ISW2Q08773 tF(GAA)H2tF(GAA)H2 73 nt1.03□□□□□ -2.24
ISW2Q08773 tF(GAA)MtF(GAA)M 73 nt1.03□□□□□ -2.24
ISW2Q08773 tF(GAA)P1tF(GAA)P1 73 nt1.03□□□□□ -2.24
ISW2Q08773 tF(GAA)P2tF(GAA)P2 73 nt1.03□□□□□ -2.24
ISW2Q08773 UTP20YBL004W 7482 nt1.02□□□□□ -2.25
ISW2Q08773 snR128snR128 126 nt1.01□□□□□ -2.25
ISW2Q08773 tA(UGC)QtA(UGC)Q 76 nt0.97□□□□□ -2.25
ISW2Q08773 UTP10YJL109C 5310 nt0.92□□□□□ -2.26
ISW2Q08773 YPR159C-AYPR159C-A 102 nt0.89□□□□□ -2.27
ISW2Q08773 tT(AGU)BtT(AGU)B 73 nt0.83□□□□□ -2.28
ISW2Q08773 tT(AGU)CtT(AGU)C 73 nt0.83□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 37.7 ms