Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 snR41snR41 95 nt-4.02□□□□□ -3.05
VPS13Q07878 Q0255Q0255 1419 nt-4.06□□□□□ -3.06
VPS13Q07878 YBL071CYBL071C 309 nt-4.06□□□□□ -3.06
VPS13Q07878 YIL115W-AYIL115W-A 372 nt-4.08□□□□□ -3.06
VPS13Q07878 YGR174W-AYGR174W-A 87 nt-4.08□□□□□ -3.06
VPS13Q07878 YLR299C-AYLR299C-A 93 nt-4.1□□□□□ -3.07
VPS13Q07878 YKL106C-AYKL106C-A 120 nt-4.13□□□□□ -3.07
VPS13Q07878 YBR178WYBR178W 375 nt-4.14□□□□□ -3.07
VPS13Q07878 TSC3YBR058C-A 243 nt-4.14□□□□□ -3.07
VPS13Q07878 tM(CAU)Q2tM(CAU)Q2 78 nt-4.15□□□□□ -3.07
VPS13Q07878 YFL019CYFL019C 354 nt-4.16□□□□□ -3.08
VPS13Q07878 YAL016C-BYAL016C-B 186 nt-4.17□□□□□ -3.08
VPS13Q07878 YJR157WYJR157W 363 nt-4.23□□□□□ -3.09
VPS13Q07878 YDR413CYDR413C 576 nt-4.25□□□□□ -3.09
VPS13Q07878 YOR329W-AYOR329W-A 210 nt-4.3□□□□□ -3.1
VPS13Q07878 YDL016CYDL016C 303 nt-4.34□□□□□ -3.1
VPS13Q07878 YBL100W-CYBL100W-C 120 nt-4.38□□□□□ -3.11
VPS13Q07878 ATP6Q0085 780 nt-4.39□□□□□ -3.11
VPS13Q07878 YFL032WYFL032W 321 nt-4.41□□□□□ -3.12
VPS13Q07878 YLR163W-AYLR163W-A 114 nt-4.47□□□□□ -3.13
VPS13Q07878 YGR035CYGR035C 351 nt-4.48□□□□□ -3.13
VPS13Q07878 YNL170WYNL170W 396 nt-4.53□□□□□ -3.13
VPS13Q07878 snR78snR78 87 nt-4.55□□□□□ -3.14
VPS13Q07878 RPL41AYDL184C 78 nt-4.57□□□□□ -3.14
VPS13Q07878 CSN9YDR179C 489 nt-4.58□□□□□ -3.14
VPS13Q07878 YOR381W-AYOR381W-A 168 nt-4.6□□□□□ -3.15
VPS13Q07878 YBR109W-AYBR109W-A 225 nt-4.67□□□□□ -3.16
VPS13Q07878 YBR296C-AYBR296C-A 120 nt-4.74□□□□□ -3.17
VPS13Q07878 YGL041CYGL041C 204 nt-4.77□□□□□ -3.17
VPS13Q07878 snR60snR60 104 nt-4.81□□□□□ -3.18
VPS13Q07878 snR58snR58 96 nt-4.81□□□□□ -3.18
VPS13Q07878 YLR222C-AYLR222C-A 231 nt-4.83□□□□□ -3.18
VPS13Q07878 YDR118W-AYDR118W-A 117 nt-4.85□□□□□ -3.19
VPS13Q07878 YEL014CYEL014C 306 nt-4.86□□□□□ -3.19
VPS13Q07878 YNL097C-BYNL097C-B 123 nt-4.87□□□□□ -3.19
VPS13Q07878 YNL028WYNL028W 318 nt-4.88□□□□□ -3.19
VPS13Q07878 YDR406W-AYDR406W-A 246 nt-4.89□□□□□ -3.19
VPS13Q07878 YCR095W-AYCR095W-A 159 nt-4.9□□□□□ -3.19
VPS13Q07878 YOR102WYOR102W 351 nt-4.9□□□□□ -3.19
VPS13Q07878 tV(UAC)QtV(UAC)Q 76 nt-4.9□□□□□ -3.19
VPS13Q07878 YDR157WYDR157W 402 nt-4.92□□□□□ -3.2
VPS13Q07878 YER006C-AYER006C-A 318 nt-4.95□□□□□ -3.2
VPS13Q07878 snR38snR38 95 nt-4.96□□□□□ -3.2
VPS13Q07878 snR54snR54 86 nt-4.98□□□□□ -3.21
VPS13Q07878 YKL118WYKL118W 312 nt-4.98□□□□□ -3.21
VPS13Q07878 snR85snR85 171 nt-4.99□□□□□ -3.21
VPS13Q07878 RPL39YJL189W 156 nt-4.99□□□□□ -3.21
VPS13Q07878 YLR120W-AYLR120W-A 102 nt-5□□□□□ -3.21
VPS13Q07878 YDL114W-AYDL114W-A 114 nt-5.02□□□□□ -3.21
VPS13Q07878 snR56snR56 88 nt-5.03□□□□□ -3.22
VPS13Q07878 YNL324WYNL324W 396 nt-5.04□□□□□ -3.22
VPS13Q07878 YLR434CYLR434C 384 nt-5.05□□□□□ -3.22
VPS13Q07878 YNL122CYNL122C 348 nt-5.05□□□□□ -3.22
VPS13Q07878 tF(GAA)QtF(GAA)Q 75 nt-5.08□□□□□ -3.22
VPS13Q07878 YMR001C-AYMR001C-A 231 nt-5.08□□□□□ -3.22
VPS13Q07878 GIM4YEL003W 336 nt-5.11□□□□□ -3.23
VPS13Q07878 Q0143Q0143 153 nt-5.12□□□□□ -3.23
VPS13Q07878 YGL188C-AYGL188C-A 141 nt-5.14□□□□□ -3.23
VPS13Q07878 YDL159W-AYDL159W-A 132 nt-5.15□□□□□ -3.23
VPS13Q07878 YOL164W-AYOL164W-A 183 nt-5.28□□□□□ -3.25
VPS13Q07878 HTL1YCR020W-B 237 nt-5.29□□□□□ -3.26
VPS13Q07878 snR48snR48 113 nt-5.3□□□□□ -3.26
VPS13Q07878 tL(UAA)QtL(UAA)Q 85 nt-5.32□□□□□ -3.26
VPS13Q07878 tW(UCA)QtW(UCA)Q 74 nt-5.35□□□□□ -3.27
VPS13Q07878 YKL096C-BYKL096C-B 150 nt-5.36□□□□□ -3.27
VPS13Q07878 YAL063C-AYAL063C-A 291 nt-5.37□□□□□ -3.27
VPS13Q07878 YEL050W-AYEL050W-A 192 nt-5.46□□□□□ -3.28
VPS13Q07878 YBR131C-AYBR131C-A 90 nt-5.47□□□□□ -3.28
VPS13Q07878 YBL053WYBL053W 375 nt-5.49□□□□□ -3.29
VPS13Q07878 AI5_BETAQ0075 1065 nt-5.52□□□□□ -3.29
VPS13Q07878 snR47snR47 99 nt-5.64□□□□□ -3.31
VPS13Q07878 YGR151CYGR151C 336 nt-5.65□□□□□ -3.31
VPS13Q07878 YHL015W-AYHL015W-A 84 nt-5.67□□□□□ -3.32
VPS13Q07878 YBL071C-BYBL071C-B 99 nt-5.67□□□□□ -3.32
VPS13Q07878 tC(GCA)QtC(GCA)Q 76 nt-5.68□□□□□ -3.32
VPS13Q07878 YPL038W-AYPL038W-A 192 nt-5.72□□□□□ -3.33
VPS13Q07878 YKL123WYKL123W 381 nt-5.73□□□□□ -3.33
VPS13Q07878 SPG3YDR504C 384 nt-5.75□□□□□ -3.33
VPS13Q07878 SOM1YEL059C-A 225 nt-5.76□□□□□ -3.33
VPS13Q07878 snR34snR34 203 nt-5.79□□□□□ -3.34
VPS13Q07878 YKL225WYKL225W 348 nt-5.83□□□□□ -3.34
VPS13Q07878 YHR175W-AYHR175W-A 150 nt-5.9□□□□□ -3.35
VPS13Q07878 YDR034C-AYDR034C-A 177 nt-5.92□□□□□ -3.36
VPS13Q07878 YGR122C-AYGR122C-A 129 nt-5.95□□□□□ -3.36
VPS13Q07878 YDR183C-AYDR183C-A 258 nt-5.96□□□□□ -3.36
VPS13Q07878 YAL037C-AYAL037C-A 93 nt-6.15□□□□□ -3.39
VPS13Q07878 snR52snR52 92 nt-6.15□□□□□ -3.39
VPS13Q07878 tS(GCU)Q1tS(GCU)Q1 86 nt-6.24□□□□□ -3.41
VPS13Q07878 YLR412C-AYLR412C-A 207 nt-6.29□□□□□ -3.42
VPS13Q07878 YOR302WYOR302W 78 nt-6.32□□□□□ -3.42
VPS13Q07878 YPL152W-AYPL152W-A 99 nt-6.32□□□□□ -3.42
VPS13Q07878 YAL066WYAL066W 309 nt-6.34□□□□□ -3.43
VPS13Q07878 YOR225WYOR225W 330 nt-6.41□□□□□ -3.43
VPS13Q07878 snR40snR40 97 nt-6.48□□□□□ -3.45
VPS13Q07878 YJL047C-AYJL047C-A 135 nt-6.54□□□□□ -3.46
VPS13Q07878 YGL007C-AYGL007C-A 87 nt-6.56□□□□□ -3.46
VPS13Q07878 YNL277W-AYNL277W-A 189 nt-6.6□□□□□ -3.47
VPS13Q07878 YLR285C-AYLR285C-A 171 nt-6.85□□□□□ -3.51
VPS13Q07878 YLR294CYLR294C 330 nt-6.9□□□□□ -3.51
VPS13Q07878 snR64snR64 101 nt-6.9□□□□□ -3.51
Retrieved 100 of 7,029 protein–RNA pairs in 81.3 ms