Protein–RNA interactions for Protein: Q07793

TY1B-DR4, Transposon Ty1-DR4 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR4Q07793 YOL013W-BYOL013W-B 291 nt-3.84□□□□□ -3.02
TY1B-DR4Q07793 snR41snR41 95 nt-3.84□□□□□ -3.02
TY1B-DR4Q07793 YLR406C-AYLR406C-A 150 nt-3.87□□□□□ -3.03
TY1B-DR4Q07793 YHR180C-BYHR180C-B 105 nt-3.88□□□□□ -3.03
TY1B-DR4Q07793 snR6snR6 112 nt-3.91□□□□□ -3.03
TY1B-DR4Q07793 BIL1YOR304C-A 231 nt-3.93□□□□□ -3.04
TY1B-DR4Q07793 YOR381W-AYOR381W-A 168 nt-3.93□□□□□ -3.04
TY1B-DR4Q07793 YOL155W-AYOL155W-A 135 nt-3.94□□□□□ -3.04
TY1B-DR4Q07793 ATP6Q0085 780 nt-3.97□□□□□ -3.04
TY1B-DR4Q07793 snR54snR54 86 nt-3.97□□□□□ -3.04
TY1B-DR4Q07793 YAL016C-BYAL016C-B 186 nt-3.98□□□□□ -3.05
TY1B-DR4Q07793 YPR012WYPR012W 255 nt-3.99□□□□□ -3.05
TY1B-DR4Q07793 YNL324WYNL324W 396 nt-4.01□□□□□ -3.05
TY1B-DR4Q07793 snR60snR60 104 nt-4.02□□□□□ -3.05
TY1B-DR4Q07793 YLR299C-AYLR299C-A 93 nt-4.03□□□□□ -3.05
TY1B-DR4Q07793 YNL028WYNL028W 318 nt-4.03□□□□□ -3.06
TY1B-DR4Q07793 snR78snR78 87 nt-4.1□□□□□ -3.07
TY1B-DR4Q07793 YMR001C-AYMR001C-A 231 nt-4.12□□□□□ -3.07
TY1B-DR4Q07793 YER006C-AYER006C-A 318 nt-4.13□□□□□ -3.07
TY1B-DR4Q07793 snR80snR80 171 nt-4.14□□□□□ -3.07
TY1B-DR4Q07793 YKL106C-AYKL106C-A 120 nt-4.14□□□□□ -3.07
TY1B-DR4Q07793 YOR329W-AYOR329W-A 210 nt-4.15□□□□□ -3.07
TY1B-DR4Q07793 YGL041CYGL041C 204 nt-4.17□□□□□ -3.08
TY1B-DR4Q07793 YJL150WYJL150W 303 nt-4.17□□□□□ -3.08
TY1B-DR4Q07793 snR73snR73 106 nt-4.18□□□□□ -3.08
TY1B-DR4Q07793 YLR120W-AYLR120W-A 102 nt-4.24□□□□□ -3.09
TY1B-DR4Q07793 YEL014CYEL014C 306 nt-4.24□□□□□ -3.09
TY1B-DR4Q07793 YOR335W-AYOR335W-A 81 nt-4.3□□□□□ -3.1
TY1B-DR4Q07793 YLR434CYLR434C 384 nt-4.33□□□□□ -3.1
TY1B-DR4Q07793 YLR222C-AYLR222C-A 231 nt-4.35□□□□□ -3.11
TY1B-DR4Q07793 RPL41BYDL133C-A 78 nt-4.37□□□□□ -3.11
TY1B-DR4Q07793 YDR413CYDR413C 576 nt-4.38□□□□□ -3.11
TY1B-DR4Q07793 HTL1YCR020W-B 237 nt-4.43□□□□□ -3.12
TY1B-DR4Q07793 YLR412C-AYLR412C-A 207 nt-4.43□□□□□ -3.12
TY1B-DR4Q07793 tW(UCA)QtW(UCA)Q 74 nt-4.44□□□□□ -3.12
TY1B-DR4Q07793 YOR102WYOR102W 351 nt-4.46□□□□□ -3.12
TY1B-DR4Q07793 YAL066WYAL066W 309 nt-4.47□□□□□ -3.13
TY1B-DR4Q07793 YBR109W-AYBR109W-A 225 nt-4.5□□□□□ -3.13
TY1B-DR4Q07793 snR87snR87 109 nt-4.53□□□□□ -3.13
TY1B-DR4Q07793 YJL136W-AYJL136W-A 84 nt-4.53□□□□□ -3.13
TY1B-DR4Q07793 Q0255Q0255 1419 nt-4.59□□□□□ -3.14
TY1B-DR4Q07793 RPL41AYDL184C 78 nt-4.7□□□□□ -3.16
TY1B-DR4Q07793 YKL118WYKL118W 312 nt-4.7□□□□□ -3.16
TY1B-DR4Q07793 snR48snR48 113 nt-4.72□□□□□ -3.16
TY1B-DR4Q07793 YGL188C-AYGL188C-A 141 nt-4.72□□□□□ -3.17
TY1B-DR4Q07793 YBR131C-AYBR131C-A 90 nt-4.72□□□□□ -3.17
TY1B-DR4Q07793 YBR296C-AYBR296C-A 120 nt-4.74□□□□□ -3.17
TY1B-DR4Q07793 snR38snR38 95 nt-4.77□□□□□ -3.17
TY1B-DR4Q07793 YGR035CYGR035C 351 nt-4.79□□□□□ -3.18
TY1B-DR4Q07793 tF(GAA)QtF(GAA)Q 75 nt-4.8□□□□□ -3.18
TY1B-DR4Q07793 YJL047C-AYJL047C-A 135 nt-4.81□□□□□ -3.18
TY1B-DR4Q07793 YDR406W-AYDR406W-A 246 nt-4.83□□□□□ -3.18
TY1B-DR4Q07793 snR56snR56 88 nt-4.86□□□□□ -3.19
TY1B-DR4Q07793 YNL122CYNL122C 348 nt-4.86□□□□□ -3.19
TY1B-DR4Q07793 YNL097C-BYNL097C-B 123 nt-4.87□□□□□ -3.19
TY1B-DR4Q07793 GIM4YEL003W 336 nt-4.9□□□□□ -3.19
TY1B-DR4Q07793 tL(UAA)QtL(UAA)Q 85 nt-4.9□□□□□ -3.19
TY1B-DR4Q07793 YDR183C-AYDR183C-A 258 nt-4.93□□□□□ -3.2
TY1B-DR4Q07793 YAL063C-AYAL063C-A 291 nt-4.99□□□□□ -3.21
TY1B-DR4Q07793 tV(UAC)QtV(UAC)Q 76 nt-5.03□□□□□ -3.21
TY1B-DR4Q07793 YKL123WYKL123W 381 nt-5.03□□□□□ -3.21
TY1B-DR4Q07793 snR85snR85 171 nt-5.04□□□□□ -3.22
TY1B-DR4Q07793 YPL038W-AYPL038W-A 192 nt-5.06□□□□□ -3.22
TY1B-DR4Q07793 YBL100W-CYBL100W-C 120 nt-5.19□□□□□ -3.24
TY1B-DR4Q07793 YDL114W-AYDL114W-A 114 nt-5.21□□□□□ -3.24
TY1B-DR4Q07793 RPL39YJL189W 156 nt-5.23□□□□□ -3.25
TY1B-DR4Q07793 YCR095W-AYCR095W-A 159 nt-5.36□□□□□ -3.27
TY1B-DR4Q07793 snR58snR58 96 nt-5.37□□□□□ -3.27
TY1B-DR4Q07793 YOL164W-AYOL164W-A 183 nt-5.42□□□□□ -3.28
TY1B-DR4Q07793 YLR285C-AYLR285C-A 171 nt-5.43□□□□□ -3.28
TY1B-DR4Q07793 YHL015W-AYHL015W-A 84 nt-5.44□□□□□ -3.28
TY1B-DR4Q07793 YDR157WYDR157W 402 nt-5.45□□□□□ -3.28
TY1B-DR4Q07793 SOM1YEL059C-A 225 nt-5.47□□□□□ -3.28
TY1B-DR4Q07793 YBL071C-BYBL071C-B 99 nt-5.47□□□□□ -3.28
TY1B-DR4Q07793 YNL170WYNL170W 396 nt-5.5□□□□□ -3.29
TY1B-DR4Q07793 snR47snR47 99 nt-5.51□□□□□ -3.29
TY1B-DR4Q07793 YOR302WYOR302W 78 nt-5.52□□□□□ -3.29
TY1B-DR4Q07793 snR52snR52 92 nt-5.52□□□□□ -3.29
TY1B-DR4Q07793 YDR118W-AYDR118W-A 117 nt-5.58□□□□□ -3.3
TY1B-DR4Q07793 YKL096C-BYKL096C-B 150 nt-5.63□□□□□ -3.31
TY1B-DR4Q07793 YNL277W-AYNL277W-A 189 nt-5.63□□□□□ -3.31
TY1B-DR4Q07793 YGR151CYGR151C 336 nt-5.64□□□□□ -3.31
TY1B-DR4Q07793 YBL053WYBL053W 375 nt-5.69□□□□□ -3.32
TY1B-DR4Q07793 YKL225WYKL225W 348 nt-5.74□□□□□ -3.33
TY1B-DR4Q07793 YHR175W-AYHR175W-A 150 nt-5.75□□□□□ -3.33
TY1B-DR4Q07793 YNR025CYNR025C 360 nt-5.75□□□□□ -3.33
TY1B-DR4Q07793 SPG3YDR504C 384 nt-5.8□□□□□ -3.34
TY1B-DR4Q07793 YDL159W-AYDL159W-A 132 nt-5.86□□□□□ -3.35
TY1B-DR4Q07793 YAL037C-AYAL037C-A 93 nt-5.91□□□□□ -3.36
TY1B-DR4Q07793 tS(GCU)Q1tS(GCU)Q1 86 nt-6□□□□□ -3.37
TY1B-DR4Q07793 YEL050W-AYEL050W-A 192 nt-6.05□□□□□ -3.38
TY1B-DR4Q07793 YDL240C-AYDL240C-A 138 nt-6.12□□□□□ -3.39
TY1B-DR4Q07793 YGR122C-AYGR122C-A 129 nt-6.15□□□□□ -3.39
TY1B-DR4Q07793 YDR034C-AYDR034C-A 177 nt-6.21□□□□□ -3.4
TY1B-DR4Q07793 YPL152W-AYPL152W-A 99 nt-6.33□□□□□ -3.42
TY1B-DR4Q07793 tC(GCA)QtC(GCA)Q 76 nt-6.42□□□□□ -3.44
TY1B-DR4Q07793 Q0143Q0143 153 nt-6.44□□□□□ -3.44
TY1B-DR4Q07793 snR65snR65 100 nt-6.61□□□□□ -3.47
TY1B-DR4Q07793 YGL007C-AYGL007C-A 87 nt-6.62□□□□□ -3.47
TY1B-DR4Q07793 tR(UCU)Q1tR(UCU)Q1 73 nt-6.66□□□□□ -3.48
Retrieved 100 of 7,029 protein–RNA pairs in 53.1 ms