Protein–RNA interactions for Protein: Q05471

SWR1, Helicase SWR1, yeastyeast

Predictions only

Length 1,514 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWR1Q05471 YLR406C-AYLR406C-A 150 nt-3.34□□□□□ -2.94
SWR1Q05471 YMR172C-AYMR172C-A 384 nt-3.34□□□□□ -2.94
SWR1Q05471 YOR376W-AYOR376W-A 156 nt-3.34□□□□□ -2.94
SWR1Q05471 YLR120W-AYLR120W-A 102 nt-3.36□□□□□ -2.95
SWR1Q05471 YBR178WYBR178W 375 nt-3.36□□□□□ -2.95
SWR1Q05471 YJR162CYJR162C 351 nt-3.37□□□□□ -2.95
SWR1Q05471 YNL337WYNL337W 255 nt-3.37□□□□□ -2.95
SWR1Q05471 YBR196C-AYBR196C-A 150 nt-3.38□□□□□ -2.95
SWR1Q05471 YGL041CYGL041C 204 nt-3.39□□□□□ -2.95
SWR1Q05471 YLR342W-AYLR342W-A 174 nt-3.39□□□□□ -2.95
SWR1Q05471 YNL122CYNL122C 348 nt-3.39□□□□□ -2.95
SWR1Q05471 YJR157WYJR157W 363 nt-3.41□□□□□ -2.96
SWR1Q05471 HTL1YCR020W-B 237 nt-3.43□□□□□ -2.96
SWR1Q05471 YAL016C-BYAL016C-B 186 nt-3.44□□□□□ -2.96
SWR1Q05471 BIL1YOR304C-A 231 nt-3.45□□□□□ -2.96
SWR1Q05471 YLR285C-AYLR285C-A 171 nt-3.47□□□□□ -2.96
SWR1Q05471 YOL083C-AYOL083C-A 141 nt-3.48□□□□□ -2.97
SWR1Q05471 YEL014CYEL014C 306 nt-3.53□□□□□ -2.97
SWR1Q05471 YOR329W-AYOR329W-A 210 nt-3.53□□□□□ -2.97
SWR1Q05471 YOR316C-AYOR316C-A 210 nt-3.54□□□□□ -2.98
SWR1Q05471 YOL013W-BYOL013W-B 291 nt-3.58□□□□□ -2.98
SWR1Q05471 YLR299C-AYLR299C-A 93 nt-3.59□□□□□ -2.98
SWR1Q05471 snR78snR78 87 nt-3.6□□□□□ -2.99
SWR1Q05471 YDR524W-CYDR524W-C 90 nt-3.6□□□□□ -2.99
SWR1Q05471 YHR180C-BYHR180C-B 105 nt-3.65□□□□□ -2.99
SWR1Q05471 YPR197CYPR197C 564 nt-3.69□□□□□ -3
SWR1Q05471 snR55snR55 98 nt-3.7□□□□□ -3
SWR1Q05471 YAL063C-AYAL063C-A 291 nt-3.8□□□□□ -3.02
SWR1Q05471 YLR222C-AYLR222C-A 231 nt-3.8□□□□□ -3.02
SWR1Q05471 YOR102WYOR102W 351 nt-3.84□□□□□ -3.02
SWR1Q05471 YPR012WYPR012W 255 nt-3.85□□□□□ -3.03
SWR1Q05471 YDR183C-AYDR183C-A 258 nt-3.86□□□□□ -3.03
SWR1Q05471 YBR131C-AYBR131C-A 90 nt-3.87□□□□□ -3.03
SWR1Q05471 YKL106C-AYKL106C-A 120 nt-3.88□□□□□ -3.03
SWR1Q05471 YGR035CYGR035C 351 nt-3.91□□□□□ -3.04
SWR1Q05471 tF(GAA)QtF(GAA)Q 75 nt-3.94□□□□□ -3.04
SWR1Q05471 YER181CYER181C 324 nt-3.95□□□□□ -3.04
SWR1Q05471 YNR025CYNR025C 360 nt-4□□□□□ -3.05
SWR1Q05471 snR6snR6 112 nt-4□□□□□ -3.05
SWR1Q05471 snR48snR48 113 nt-4.02□□□□□ -3.05
SWR1Q05471 YGL188C-AYGL188C-A 141 nt-4.03□□□□□ -3.05
SWR1Q05471 YDR413CYDR413C 576 nt-4.06□□□□□ -3.06
SWR1Q05471 YKL118WYKL118W 312 nt-4.07□□□□□ -3.06
SWR1Q05471 YPL038W-AYPL038W-A 192 nt-4.16□□□□□ -3.08
SWR1Q05471 snR80snR80 171 nt-4.21□□□□□ -3.08
SWR1Q05471 tL(UAA)QtL(UAA)Q 85 nt-4.22□□□□□ -3.09
SWR1Q05471 YBR109W-AYBR109W-A 225 nt-4.23□□□□□ -3.09
SWR1Q05471 YNL097C-BYNL097C-B 123 nt-4.24□□□□□ -3.09
SWR1Q05471 YOL155W-AYOL155W-A 135 nt-4.24□□□□□ -3.09
SWR1Q05471 YJL150WYJL150W 303 nt-4.26□□□□□ -3.09
SWR1Q05471 snR73snR73 106 nt-4.28□□□□□ -3.09
SWR1Q05471 YDR524C-AYDR524C-A 120 nt-4.31□□□□□ -3.1
SWR1Q05471 RPL41BYDL133C-A 78 nt-4.35□□□□□ -3.11
SWR1Q05471 YOR335W-AYOR335W-A 81 nt-4.35□□□□□ -3.11
SWR1Q05471 RPL41AYDL184C 78 nt-4.37□□□□□ -3.11
SWR1Q05471 YBR296C-AYBR296C-A 120 nt-4.38□□□□□ -3.11
SWR1Q05471 snR56snR56 88 nt-4.41□□□□□ -3.12
SWR1Q05471 YNL198CYNL198C 303 nt-4.41□□□□□ -3.12
SWR1Q05471 GIM4YEL003W 336 nt-4.42□□□□□ -3.12
SWR1Q05471 RPL39YJL189W 156 nt-4.43□□□□□ -3.12
SWR1Q05471 tR(UCU)Q1tR(UCU)Q1 73 nt-4.52□□□□□ -3.13
SWR1Q05471 YNL277W-AYNL277W-A 189 nt-4.53□□□□□ -3.13
SWR1Q05471 snR38snR38 95 nt-4.55□□□□□ -3.14
SWR1Q05471 YHL015W-AYHL015W-A 84 nt-4.6□□□□□ -3.15
SWR1Q05471 snR52snR52 92 nt-4.6□□□□□ -3.15
SWR1Q05471 YOR302WYOR302W 78 nt-4.62□□□□□ -3.15
SWR1Q05471 YDR406W-AYDR406W-A 246 nt-4.72□□□□□ -3.17
SWR1Q05471 YEL050W-AYEL050W-A 192 nt-4.77□□□□□ -3.17
SWR1Q05471 SOM1YEL059C-A 225 nt-4.78□□□□□ -3.17
SWR1Q05471 YDL240C-AYDL240C-A 138 nt-4.83□□□□□ -3.18
SWR1Q05471 YCR095W-AYCR095W-A 159 nt-4.89□□□□□ -3.19
SWR1Q05471 snR85snR85 171 nt-4.94□□□□□ -3.2
SWR1Q05471 tV(UAC)QtV(UAC)Q 76 nt-4.97□□□□□ -3.2
SWR1Q05471 YOL164W-AYOL164W-A 183 nt-4.97□□□□□ -3.2
SWR1Q05471 YDR157WYDR157W 402 nt-4.98□□□□□ -3.21
SWR1Q05471 YBL071C-BYBL071C-B 99 nt-5.02□□□□□ -3.21
SWR1Q05471 YDL114W-AYDL114W-A 114 nt-5.04□□□□□ -3.22
SWR1Q05471 snR87snR87 109 nt-5.07□□□□□ -3.22
SWR1Q05471 YGR151CYGR151C 336 nt-5.08□□□□□ -3.22
SWR1Q05471 snR47snR47 99 nt-5.1□□□□□ -3.23
SWR1Q05471 YPL152W-AYPL152W-A 99 nt-5.19□□□□□ -3.24
SWR1Q05471 YBL053WYBL053W 375 nt-5.37□□□□□ -3.27
SWR1Q05471 snR65snR65 100 nt-5.38□□□□□ -3.27
SWR1Q05471 YDR118W-AYDR118W-A 117 nt-5.38□□□□□ -3.27
SWR1Q05471 YKL225WYKL225W 348 nt-5.38□□□□□ -3.27
SWR1Q05471 YBL100W-CYBL100W-C 120 nt-5.38□□□□□ -3.27
SWR1Q05471 YAL037C-AYAL037C-A 93 nt-5.38□□□□□ -3.27
SWR1Q05471 YJL136W-AYJL136W-A 84 nt-5.43□□□□□ -3.28
SWR1Q05471 SPG3YDR504C 384 nt-5.49□□□□□ -3.29
SWR1Q05471 snR58snR58 96 nt-5.58□□□□□ -3.3
SWR1Q05471 YHR175W-AYHR175W-A 150 nt-5.59□□□□□ -3.3
SWR1Q05471 tS(GCU)Q1tS(GCU)Q1 86 nt-5.6□□□□□ -3.31
SWR1Q05471 YKL096C-BYKL096C-B 150 nt-5.63□□□□□ -3.31
SWR1Q05471 Q0017Q0017 162 nt-5.67□□□□□ -3.32
SWR1Q05471 YDL159W-AYDL159W-A 132 nt-5.89□□□□□ -3.35
SWR1Q05471 YGR122C-AYGR122C-A 129 nt-5.89□□□□□ -3.35
SWR1Q05471 VAR1Q0140 1197 nt-5.97□□□□□ -3.37
SWR1Q05471 YCL001W-BYCL001W-B 255 nt-6.01□□□□□ -3.37
SWR1Q05471 YDR034C-AYDR034C-A 177 nt-6.03□□□□□ -3.37
SWR1Q05471 YOR231C-AYOR231C-A 201 nt-6.07□□□□□ -3.38
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms