Protein–RNA interactions for Protein: P47179

DAN4, Cell wall protein DAN4, yeastyeast

Predictions only

Length 1,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DAN4P47179 YHR180W-AYHR180W-A 183 nt1.94□□□□□ -2.1
DAN4P47179 TRM732YMR259C 4263 nt1.93□□□□□ -2.1
DAN4P47179 PMD1YER132C 5262 nt1.92□□□□□ -2.1
DAN4P47179 NUP188YML103C 4968 nt1.92□□□□□ -2.1
DAN4P47179 CLU1YMR012W 3834 nt1.9□□□□□ -2.11
DAN4P47179 YHR214C-BYHR214C-B 5382 nt1.89□□□□□ -2.11
DAN4P47179 FIG2YCR089W 4830 nt1.88□□□□□ -2.11
DAN4P47179 PEP1YBL017C 4740 nt1.88□□□□□ -2.11
DAN4P47179 NUP192YJL039C 5052 nt1.88□□□□□ -2.11
DAN4P47179 FAB1YFR019W 6837 nt1.88□□□□□ -2.11
DAN4P47179 FKS1YLR342W 5631 nt1.87□□□□□ -2.11
DAN4P47179 MLP2YIL149C 5040 nt1.86□□□□□ -2.11
DAN4P47179 BST1YFL025C 3090 nt1.85□□□□□ -2.11
DAN4P47179 DNF3YMR162C 4971 nt1.85□□□□□ -2.11
DAN4P47179 LAA1YJL207C 6045 nt1.84□□□□□ -2.11
DAN4P47179 CDC39YCR093W 6327 nt1.83□□□□□ -2.12
DAN4P47179 TMA7YLR262C-A 195 nt1.83□□□□□ -2.12
DAN4P47179 YMR272W-BYMR272W-B 108 nt1.82□□□□□ -2.12
DAN4P47179 YNL054W-BYNL054W-B 5250 nt1.81□□□□□ -2.12
DAN4P47179 YNL284C-BYNL284C-B 5268 nt1.8□□□□□ -2.12
DAN4P47179 YGR130CYGR130C 2451 nt1.77□□□□□ -2.13
DAN4P47179 CFT1YDR301W 4074 nt1.76□□□□□ -2.13
DAN4P47179 YMR247W-AYMR247W-A 144 nt1.75□□□□□ -2.13
DAN4P47179 SSK2YNR031C 4740 nt1.74□□□□□ -2.13
DAN4P47179 snR77snR77 88 nt1.72□□□□□ -2.13
DAN4P47179 BRR2YER172C 6492 nt1.71□□□□□ -2.14
DAN4P47179 VAM6YDL077C 3150 nt1.69□□□□□ -2.14
DAN4P47179 SPT7YBR081C 3999 nt1.66□□□□□ -2.14
DAN4P47179 MYO1YHR023W 5787 nt1.65□□□□□ -2.15
DAN4P47179 tT(UGU)HtT(UGU)H 72 nt1.62□□□□□ -2.15
DAN4P47179 YOR192C-BYOR192C-B 5313 nt1.6□□□□□ -2.15
DAN4P47179 YOR316C-AYOR316C-A 210 nt1.6□□□□□ -2.15
DAN4P47179 PAU24YBR301W 363 nt1.6□□□□□ -2.15
DAN4P47179 tQ(UUG)E2tQ(UUG)E2 72 nt1.59□□□□□ -2.15
DAN4P47179 VPS15YBR097W 4365 nt1.57□□□□□ -2.16
DAN4P47179 LTE1YAL024C 4308 nt1.57□□□□□ -2.16
DAN4P47179 YPR117WYPR117W 7470 nt1.56□□□□□ -2.16
DAN4P47179 SBH2YER019C-A 267 nt1.53□□□□□ -2.16
DAN4P47179 MEC1YBR136W 7107 nt1.51□□□□□ -2.17
DAN4P47179 SOV1YMR066W 2697 nt1.5□□□□□ -2.17
DAN4P47179 IRA1YBR140C 9279 nt1.5□□□□□ -2.17
DAN4P47179 RKR1YMR247C 4689 nt1.42□□□□□ -2.18
DAN4P47179 CCH1YGR217W 6120 nt1.38□□□□□ -2.19
DAN4P47179 tH(GUG)E1tH(GUG)E1 72 nt1.38□□□□□ -2.19
DAN4P47179 tH(GUG)E2tH(GUG)E2 72 nt1.38□□□□□ -2.19
DAN4P47179 tH(GUG)G1tH(GUG)G1 72 nt1.38□□□□□ -2.19
DAN4P47179 tH(GUG)G2tH(GUG)G2 72 nt1.38□□□□□ -2.19
DAN4P47179 tH(GUG)HtH(GUG)H 72 nt1.38□□□□□ -2.19
DAN4P47179 tH(GUG)KtH(GUG)K 72 nt1.38□□□□□ -2.19
DAN4P47179 tH(GUG)MtH(GUG)M 72 nt1.38□□□□□ -2.19
DAN4P47179 IML1YJR138W 4755 nt1.37□□□□□ -2.19
DAN4P47179 tC(GCA)QtC(GCA)Q 76 nt1.36□□□□□ -2.19
DAN4P47179 BUD3YCL014W 4911 nt1.36□□□□□ -2.19
DAN4P47179 tV(UAC)BtV(UAC)B 74 nt1.33□□□□□ -2.2
DAN4P47179 tV(UAC)DtV(UAC)D 74 nt1.33□□□□□ -2.2
DAN4P47179 SCC2YDR180W 4482 nt1.3□□□□□ -2.2
DAN4P47179 YBL100W-BYBL100W-B 5313 nt1.29□□□□□ -2.2
DAN4P47179 BEM2YER155C 6504 nt1.28□□□□□ -2.2
DAN4P47179 HKR1YDR420W 5409 nt1.28□□□□□ -2.2
DAN4P47179 tF(GAA)BtF(GAA)B 73 nt1.27□□□□□ -2.21
DAN4P47179 tF(GAA)FtF(GAA)F 73 nt1.27□□□□□ -2.21
DAN4P47179 tF(GAA)GtF(GAA)G 73 nt1.27□□□□□ -2.21
DAN4P47179 tF(GAA)H1tF(GAA)H1 73 nt1.27□□□□□ -2.21
DAN4P47179 tF(GAA)H2tF(GAA)H2 73 nt1.27□□□□□ -2.21
DAN4P47179 tF(GAA)MtF(GAA)M 73 nt1.27□□□□□ -2.21
DAN4P47179 tF(GAA)P1tF(GAA)P1 73 nt1.27□□□□□ -2.21
DAN4P47179 tF(GAA)P2tF(GAA)P2 73 nt1.27□□□□□ -2.21
DAN4P47179 YML100W-AYML100W-A 174 nt1.26□□□□□ -2.21
DAN4P47179 DOP1YDR141C 5097 nt1.22□□□□□ -2.21
DAN4P47179 THO2YNL139C 4794 nt1.21□□□□□ -2.22
DAN4P47179 RPL41BYDL133C-A 78 nt1.2□□□□□ -2.22
DAN4P47179 YOL014WYOL014W 375 nt1.18□□□□□ -2.22
DAN4P47179 MLP1YKR095W 5628 nt1.14□□□□□ -2.23
DAN4P47179 YJR029WYJR029W 5268 nt1.12□□□□□ -2.23
DAN4P47179 YKL145W-AYKL145W-A 93 nt1.09□□□□□ -2.23
DAN4P47179 UTP20YBL004W 7482 nt1.09□□□□□ -2.24
DAN4P47179 YOR186C-AYOR186C-A 210 nt1.08□□□□□ -2.24
DAN4P47179 YPR137C-BYPR137C-B 5268 nt1.05□□□□□ -2.24
DAN4P47179 snR58snR58 96 nt1.03□□□□□ -2.24
DAN4P47179 PAU9YBL108C-A 129 nt1.03□□□□□ -2.24
DAN4P47179 YOR335W-AYOR335W-A 81 nt1.03□□□□□ -2.24
DAN4P47179 ESP1YGR098C 4893 nt1.02□□□□□ -2.25
DAN4P47179 IQG1YPL242C 4488 nt0.93□□□□□ -2.26
DAN4P47179 snR6snR6 112 nt0.92□□□□□ -2.26
DAN4P47179 EMT1tM(CAU)D 73 nt0.9□□□□□ -2.27
DAN4P47179 EMT5tM(CAU)J1 73 nt0.9□□□□□ -2.27
DAN4P47179 EMT3tM(CAU)J2 73 nt0.9□□□□□ -2.27
DAN4P47179 EMT4tM(CAU)M 73 nt0.9□□□□□ -2.27
DAN4P47179 EMT2tM(CAU)O2 73 nt0.9□□□□□ -2.27
DAN4P47179 FMP27YLR454W 7887 nt0.86□□□□□ -2.27
DAN4P47179 YJL113WYJL113W 4647 nt0.82□□□□□ -2.28
DAN4P47179 YMR272W-AYMR272W-A 114 nt0.82□□□□□ -2.28
DAN4P47179 snR73snR73 106 nt0.81□□□□□ -2.28
DAN4P47179 snR128snR128 126 nt0.77□□□□□ -2.29
DAN4P47179 snR161snR161 161 nt0.75□□□□□ -2.29
DAN4P47179 YPR159C-AYPR159C-A 102 nt0.75□□□□□ -2.29
DAN4P47179 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
DAN4P47179 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
DAN4P47179 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
DAN4P47179 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 30.6 ms