Protein–RNA interactions for Protein: P42839

VNX1, Low affinity vacuolar monovalent cation/H(+) antiporter, yeastyeast

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VNX1P42839 YOR316C-AYOR316C-A 210 nt2.01□□□□□ -2.09
VNX1P42839 NUP145YGL092W 3954 nt2.01□□□□□ -2.09
VNX1P42839 TRM732YMR259C 4263 nt2.01□□□□□ -2.09
VNX1P42839 BNI1YNL271C 5862 nt2.01□□□□□ -2.09
VNX1P42839 BST1YFL025C 3090 nt2□□□□□ -2.09
VNX1P42839 TOR2YKL203C 7425 nt1.98□□□□□ -2.09
VNX1P42839 YMR045CYMR045C 5268 nt1.98□□□□□ -2.09
VNX1P42839 USO1YDL058W 5373 nt1.97□□□□□ -2.09
VNX1P42839 LAA1YJL207C 6045 nt1.96□□□□□ -2.1
VNX1P42839 SEC16YPL085W 6588 nt1.95□□□□□ -2.1
VNX1P42839 SBH2YER019C-A 267 nt1.94□□□□□ -2.1
VNX1P42839 TMA7YLR262C-A 195 nt1.91□□□□□ -2.1
VNX1P42839 tC(GCA)QtC(GCA)Q 76 nt1.9□□□□□ -2.11
VNX1P42839 VAM6YDL077C 3150 nt1.9□□□□□ -2.11
VNX1P42839 SPP41YDR464W 4308 nt1.88□□□□□ -2.11
VNX1P42839 PMD1YER132C 5262 nt1.88□□□□□ -2.11
VNX1P42839 SSK2YNR031C 4740 nt1.88□□□□□ -2.11
VNX1P42839 NUP188YML103C 4968 nt1.86□□□□□ -2.11
VNX1P42839 MON2YNL297C 4911 nt1.86□□□□□ -2.11
VNX1P42839 MYO1YHR023W 5787 nt1.85□□□□□ -2.11
VNX1P42839 YPR117WYPR117W 7470 nt1.85□□□□□ -2.11
VNX1P42839 YOR093CYOR093C 4947 nt1.81□□□□□ -2.12
VNX1P42839 CDC39YCR093W 6327 nt1.8□□□□□ -2.12
VNX1P42839 FKS1YLR342W 5631 nt1.78□□□□□ -2.12
VNX1P42839 SPT7YBR081C 3999 nt1.78□□□□□ -2.12
VNX1P42839 YHR214C-BYHR214C-B 5382 nt1.76□□□□□ -2.13
VNX1P42839 FAB1YFR019W 6837 nt1.72□□□□□ -2.13
VNX1P42839 PEP1YBL017C 4740 nt1.69□□□□□ -2.14
VNX1P42839 RPL41BYDL133C-A 78 nt1.69□□□□□ -2.14
VNX1P42839 YOR192C-BYOR192C-B 5313 nt1.68□□□□□ -2.14
VNX1P42839 YMR272W-BYMR272W-B 108 nt1.67□□□□□ -2.14
VNX1P42839 YOL014WYOL014W 375 nt1.67□□□□□ -2.14
VNX1P42839 tT(UGU)HtT(UGU)H 72 nt1.66□□□□□ -2.14
VNX1P42839 CFT1YDR301W 4074 nt1.66□□□□□ -2.14
VNX1P42839 DNF3YMR162C 4971 nt1.66□□□□□ -2.14
VNX1P42839 VPS15YBR097W 4365 nt1.63□□□□□ -2.15
VNX1P42839 YMR247W-AYMR247W-A 144 nt1.63□□□□□ -2.15
VNX1P42839 FIG2YCR089W 4830 nt1.57□□□□□ -2.16
VNX1P42839 LTE1YAL024C 4308 nt1.57□□□□□ -2.16
VNX1P42839 BRR2YER172C 6492 nt1.53□□□□□ -2.16
VNX1P42839 YKL145W-AYKL145W-A 93 nt1.49□□□□□ -2.17
VNX1P42839 YML100W-AYML100W-A 174 nt1.48□□□□□ -2.17
VNX1P42839 RKR1YMR247C 4689 nt1.44□□□□□ -2.18
VNX1P42839 snR58snR58 96 nt1.44□□□□□ -2.18
VNX1P42839 BUD3YCL014W 4911 nt1.43□□□□□ -2.18
VNX1P42839 YBL100W-BYBL100W-B 5313 nt1.41□□□□□ -2.18
VNX1P42839 YOR335W-AYOR335W-A 81 nt1.41□□□□□ -2.18
VNX1P42839 MEC1YBR136W 7107 nt1.39□□□□□ -2.19
VNX1P42839 IRA1YBR140C 9279 nt1.37□□□□□ -2.19
VNX1P42839 tQ(UUG)E2tQ(UUG)E2 72 nt1.36□□□□□ -2.19
VNX1P42839 THO2YNL139C 4794 nt1.36□□□□□ -2.19
VNX1P42839 HKR1YDR420W 5409 nt1.35□□□□□ -2.19
VNX1P42839 YJR029WYJR029W 5268 nt1.34□□□□□ -2.19
VNX1P42839 PAU24YBR301W 363 nt1.33□□□□□ -2.2
VNX1P42839 ESP1YGR098C 4893 nt1.32□□□□□ -2.2
VNX1P42839 YJL113WYJL113W 4647 nt1.29□□□□□ -2.2
VNX1P42839 CCH1YGR217W 6120 nt1.29□□□□□ -2.2
VNX1P42839 snR6snR6 112 nt1.28□□□□□ -2.2
VNX1P42839 tH(GUG)E1tH(GUG)E1 72 nt1.25□□□□□ -2.21
VNX1P42839 tH(GUG)E2tH(GUG)E2 72 nt1.25□□□□□ -2.21
VNX1P42839 tH(GUG)G1tH(GUG)G1 72 nt1.25□□□□□ -2.21
VNX1P42839 tH(GUG)G2tH(GUG)G2 72 nt1.25□□□□□ -2.21
VNX1P42839 tH(GUG)HtH(GUG)H 72 nt1.25□□□□□ -2.21
VNX1P42839 tH(GUG)KtH(GUG)K 72 nt1.25□□□□□ -2.21
VNX1P42839 tH(GUG)MtH(GUG)M 72 nt1.25□□□□□ -2.21
VNX1P42839 IML1YJR138W 4755 nt1.21□□□□□ -2.22
VNX1P42839 SCC2YDR180W 4482 nt1.19□□□□□ -2.22
VNX1P42839 FMP27YLR454W 7887 nt1.19□□□□□ -2.22
VNX1P42839 tV(UAC)BtV(UAC)B 74 nt1.18□□□□□ -2.22
VNX1P42839 tV(UAC)DtV(UAC)D 74 nt1.18□□□□□ -2.22
VNX1P42839 YPR137C-BYPR137C-B 5268 nt1.17□□□□□ -2.22
VNX1P42839 PAU9YBL108C-A 129 nt1.17□□□□□ -2.22
VNX1P42839 YOR186C-AYOR186C-A 210 nt1.14□□□□□ -2.23
VNX1P42839 snR73snR73 106 nt1.12□□□□□ -2.23
VNX1P42839 MLP1YKR095W 5628 nt1.12□□□□□ -2.23
VNX1P42839 BEM2YER155C 6504 nt1.09□□□□□ -2.23
VNX1P42839 tF(GAA)BtF(GAA)B 73 nt1.05□□□□□ -2.24
VNX1P42839 tF(GAA)FtF(GAA)F 73 nt1.05□□□□□ -2.24
VNX1P42839 tF(GAA)GtF(GAA)G 73 nt1.05□□□□□ -2.24
VNX1P42839 tF(GAA)H1tF(GAA)H1 73 nt1.05□□□□□ -2.24
VNX1P42839 tF(GAA)H2tF(GAA)H2 73 nt1.05□□□□□ -2.24
VNX1P42839 tF(GAA)MtF(GAA)M 73 nt1.05□□□□□ -2.24
VNX1P42839 tF(GAA)P1tF(GAA)P1 73 nt1.05□□□□□ -2.24
VNX1P42839 tF(GAA)P2tF(GAA)P2 73 nt1.05□□□□□ -2.24
VNX1P42839 DOP1YDR141C 5097 nt1.03□□□□□ -2.24
VNX1P42839 YMR272W-AYMR272W-A 114 nt1□□□□□ -2.25
VNX1P42839 snR161snR161 161 nt0.96□□□□□ -2.26
VNX1P42839 IQG1YPL242C 4488 nt0.95□□□□□ -2.26
VNX1P42839 EMT1tM(CAU)D 73 nt0.95□□□□□ -2.26
VNX1P42839 EMT5tM(CAU)J1 73 nt0.95□□□□□ -2.26
VNX1P42839 EMT3tM(CAU)J2 73 nt0.95□□□□□ -2.26
VNX1P42839 EMT4tM(CAU)M 73 nt0.95□□□□□ -2.26
VNX1P42839 EMT2tM(CAU)O2 73 nt0.95□□□□□ -2.26
VNX1P42839 UTP20YBL004W 7482 nt0.91□□□□□ -2.26
VNX1P42839 snR128snR128 126 nt0.82□□□□□ -2.28
VNX1P42839 tA(UGC)QtA(UGC)Q 76 nt0.79□□□□□ -2.28
VNX1P42839 UTP10YJL109C 5310 nt0.75□□□□□ -2.29
VNX1P42839 YPR159C-AYPR159C-A 102 nt0.73□□□□□ -2.29
VNX1P42839 URB1YKL014C 5295 nt0.65□□□□□ -2.31
VNX1P42839 snR87snR87 109 nt0.63□□□□□ -2.31
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms