Protein–RNA interactions for Protein: P40045

TDA2, Topoisomerase I damage affected protein 2, yeastyeast

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA2P40045 tR(UCU)Q1tR(UCU)Q1 73 nt-2.31□□□□□ -2.78
TDA2P40045 YMR172C-AYMR172C-A 384 nt-2.35□□□□□ -2.79
TDA2P40045 YEL014CYEL014C 306 nt-2.37□□□□□ -2.79
TDA2P40045 YBR178WYBR178W 375 nt-2.38□□□□□ -2.79
TDA2P40045 YDL159C-BYDL159C-B 177 nt-2.39□□□□□ -2.79
TDA2P40045 YGR035CYGR035C 351 nt-2.42□□□□□ -2.8
TDA2P40045 YAL063C-AYAL063C-A 291 nt-2.44□□□□□ -2.8
TDA2P40045 YOR329W-AYOR329W-A 210 nt-2.47□□□□□ -2.8
TDA2P40045 YBR182C-AYBR182C-A 195 nt-2.49□□□□□ -2.81
TDA2P40045 YBR126W-BYBR126W-B 144 nt-2.5□□□□□ -2.81
TDA2P40045 YAL016C-BYAL016C-B 186 nt-2.53□□□□□ -2.81
TDA2P40045 YAL068W-AYAL068W-A 255 nt-2.54□□□□□ -2.82
TDA2P40045 snR78snR78 87 nt-2.57□□□□□ -2.82
TDA2P40045 YJR157WYJR157W 363 nt-2.57□□□□□ -2.82
TDA2P40045 YDR183C-AYDR183C-A 258 nt-2.58□□□□□ -2.82
TDA2P40045 YBR131C-AYBR131C-A 90 nt-2.59□□□□□ -2.82
TDA2P40045 YOR293C-AYOR293C-A 150 nt-2.61□□□□□ -2.83
TDA2P40045 YOR309CYOR309C 381 nt-2.61□□□□□ -2.83
TDA2P40045 YOR376W-AYOR376W-A 156 nt-2.65□□□□□ -2.83
TDA2P40045 YBR196C-AYBR196C-A 150 nt-2.65□□□□□ -2.83
TDA2P40045 YLR299C-AYLR299C-A 93 nt-2.66□□□□□ -2.84
TDA2P40045 YEL050W-AYEL050W-A 192 nt-2.7□□□□□ -2.84
TDA2P40045 tF(GAA)QtF(GAA)Q 75 nt-2.71□□□□□ -2.84
TDA2P40045 YLR222C-AYLR222C-A 231 nt-2.73□□□□□ -2.85
TDA2P40045 YER181CYER181C 324 nt-2.74□□□□□ -2.85
TDA2P40045 YPL038W-AYPL038W-A 192 nt-2.79□□□□□ -2.86
TDA2P40045 YOR102WYOR102W 351 nt-2.8□□□□□ -2.86
TDA2P40045 YPR197CYPR197C 564 nt-2.83□□□□□ -2.86
TDA2P40045 YGL188C-AYGL188C-A 141 nt-2.87□□□□□ -2.87
TDA2P40045 YDR413CYDR413C 576 nt-2.89□□□□□ -2.87
TDA2P40045 YHR180C-BYHR180C-B 105 nt-2.89□□□□□ -2.87
TDA2P40045 snR48snR48 113 nt-2.89□□□□□ -2.87
TDA2P40045 YLR342W-AYLR342W-A 174 nt-2.91□□□□□ -2.88
TDA2P40045 YOR316C-AYOR316C-A 210 nt-2.91□□□□□ -2.88
TDA2P40045 snR55snR55 98 nt-2.92□□□□□ -2.88
TDA2P40045 YNL097C-BYNL097C-B 123 nt-2.93□□□□□ -2.88
TDA2P40045 YKL118WYKL118W 312 nt-2.95□□□□□ -2.88
TDA2P40045 tL(UAA)QtL(UAA)Q 85 nt-2.96□□□□□ -2.88
TDA2P40045 RPL39YJL189W 156 nt-2.96□□□□□ -2.88
TDA2P40045 YDR524W-CYDR524W-C 90 nt-2.99□□□□□ -2.89
TDA2P40045 YNL277W-AYNL277W-A 189 nt-2.99□□□□□ -2.89
TDA2P40045 YKL106C-AYKL106C-A 120 nt-3□□□□□ -2.89
TDA2P40045 YPR012WYPR012W 255 nt-3.03□□□□□ -2.89
TDA2P40045 YOL083C-AYOL083C-A 141 nt-3.04□□□□□ -2.9
TDA2P40045 YDR543CYDR543C 300 nt-3.15□□□□□ -2.91
TDA2P40045 snR52snR52 92 nt-3.16□□□□□ -2.92
TDA2P40045 YDR157WYDR157W 402 nt-3.17□□□□□ -2.92
TDA2P40045 YDL240C-AYDL240C-A 138 nt-3.18□□□□□ -2.92
TDA2P40045 YHL015W-AYHL015W-A 84 nt-3.18□□□□□ -2.92
TDA2P40045 YJL150WYJL150W 303 nt-3.18□□□□□ -2.92
TDA2P40045 YOL155W-AYOL155W-A 135 nt-3.19□□□□□ -2.92
TDA2P40045 YOR302WYOR302W 78 nt-3.19□□□□□ -2.92
TDA2P40045 snR6snR6 112 nt-3.25□□□□□ -2.93
TDA2P40045 GIM4YEL003W 336 nt-3.27□□□□□ -2.93
TDA2P40045 YBR109W-AYBR109W-A 225 nt-3.3□□□□□ -2.94
TDA2P40045 YBR296C-AYBR296C-A 120 nt-3.38□□□□□ -2.95
TDA2P40045 YNL198CYNL198C 303 nt-3.39□□□□□ -2.95
TDA2P40045 RPL41AYDL184C 78 nt-3.4□□□□□ -2.95
TDA2P40045 snR56snR56 88 nt-3.42□□□□□ -2.96
TDA2P40045 snR73snR73 106 nt-3.43□□□□□ -2.96
TDA2P40045 YOR335W-AYOR335W-A 81 nt-3.43□□□□□ -2.96
TDA2P40045 snR80snR80 171 nt-3.47□□□□□ -2.96
TDA2P40045 YDR118W-AYDR118W-A 117 nt-3.48□□□□□ -2.97
TDA2P40045 SOM1YEL059C-A 225 nt-3.5□□□□□ -2.97
TDA2P40045 YPL152W-AYPL152W-A 99 nt-3.5□□□□□ -2.97
TDA2P40045 Q0017Q0017 162 nt-3.55□□□□□ -2.98
TDA2P40045 RPL41BYDL133C-A 78 nt-3.57□□□□□ -2.98
TDA2P40045 snR38snR38 95 nt-3.57□□□□□ -2.98
TDA2P40045 snR65snR65 100 nt-3.64□□□□□ -2.99
TDA2P40045 YOL166W-AYOL166W-A 156 nt-3.64□□□□□ -2.99
TDA2P40045 Q0142Q0142 177 nt-3.67□□□□□ -3
TDA2P40045 YCR095W-AYCR095W-A 159 nt-3.69□□□□□ -3
TDA2P40045 YDR524C-AYDR524C-A 120 nt-3.71□□□□□ -3
TDA2P40045 VAR1Q0140 1197 nt-3.77□□□□□ -3.01
TDA2P40045 YBL053WYBL053W 375 nt-3.78□□□□□ -3.01
TDA2P40045 YBL071C-BYBL071C-B 99 nt-3.8□□□□□ -3.02
TDA2P40045 YGR151CYGR151C 336 nt-3.82□□□□□ -3.02
TDA2P40045 YOL164W-AYOL164W-A 183 nt-3.83□□□□□ -3.02
TDA2P40045 YDR406W-AYDR406W-A 246 nt-3.87□□□□□ -3.03
TDA2P40045 snR47snR47 99 nt-3.9□□□□□ -3.03
TDA2P40045 YDL114W-AYDL114W-A 114 nt-4.04□□□□□ -3.06
TDA2P40045 snR85snR85 171 nt-4.04□□□□□ -3.06
TDA2P40045 tV(UAC)QtV(UAC)Q 76 nt-4.07□□□□□ -3.06
TDA2P40045 YBL100W-CYBL100W-C 120 nt-4.07□□□□□ -3.06
TDA2P40045 YAL037C-AYAL037C-A 93 nt-4.1□□□□□ -3.07
TDA2P40045 YOR231C-AYOR231C-A 201 nt-4.13□□□□□ -3.07
TDA2P40045 YKL225WYKL225W 348 nt-4.2□□□□□ -3.08
TDA2P40045 snR87snR87 109 nt-4.21□□□□□ -3.08
TDA2P40045 SPG3YDR504C 384 nt-4.26□□□□□ -3.09
TDA2P40045 tS(GCU)Q1tS(GCU)Q1 86 nt-4.29□□□□□ -3.1
TDA2P40045 YNL337WYNL337W 255 nt-4.3□□□□□ -3.1
TDA2P40045 YJR162CYJR162C 351 nt-4.36□□□□□ -3.11
TDA2P40045 YCL001W-BYCL001W-B 255 nt-4.36□□□□□ -3.11
TDA2P40045 YHR175W-AYHR175W-A 150 nt-4.37□□□□□ -3.11
TDA2P40045 tR(ACG)Q2tR(ACG)Q2 74 nt-4.56□□□□□ -3.14
TDA2P40045 YKL096C-BYKL096C-B 150 nt-4.6□□□□□ -3.15
TDA2P40045 YGR122C-AYGR122C-A 129 nt-4.62□□□□□ -3.15
TDA2P40045 YMR046W-AYMR046W-A 129 nt-4.64□□□□□ -3.15
TDA2P40045 YDL159W-AYDL159W-A 132 nt-4.66□□□□□ -3.16
TDA2P40045 snR58snR58 96 nt-4.76□□□□□ -3.17
Retrieved 100 of 7,029 protein–RNA pairs in 36 ms