Protein–RNA interactions for Protein: P39083

RGA1, Rho-type GTPase-activating protein 1, yeastyeast

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RGA1P39083 MYO4YAL029C 4416 nt1.99□□□□□ -2.09
RGA1P39083 CAT8YMR280C 4302 nt1.98□□□□□ -2.09
RGA1P39083 FKS1YLR342W 5631 nt1.97□□□□□ -2.09
RGA1P39083 TMA7YLR262C-A 195 nt1.97□□□□□ -2.09
RGA1P39083 UBP2YOR124C 3819 nt1.97□□□□□ -2.09
RGA1P39083 YOR316C-AYOR316C-A 210 nt1.97□□□□□ -2.09
RGA1P39083 MSN5YDR335W 3675 nt1.97□□□□□ -2.09
RGA1P39083 SMC4YLR086W 4257 nt1.97□□□□□ -2.09
RGA1P39083 YSP1YHR155W 3687 nt1.95□□□□□ -2.1
RGA1P39083 VPS15YBR097W 4365 nt1.95□□□□□ -2.1
RGA1P39083 NEO1YIL048W 3456 nt1.95□□□□□ -2.1
RGA1P39083 tT(UGU)HtT(UGU)H 72 nt1.9□□□□□ -2.11
RGA1P39083 YMR247W-AYMR247W-A 144 nt1.89□□□□□ -2.11
RGA1P39083 SWI4YER111C 3282 nt1.88□□□□□ -2.11
RGA1P39083 YOR093CYOR093C 4947 nt1.88□□□□□ -2.11
RGA1P39083 SBH2YER019C-A 267 nt1.87□□□□□ -2.11
RGA1P39083 CLU1YMR012W 3834 nt1.85□□□□□ -2.11
RGA1P39083 MON2YNL297C 4911 nt1.84□□□□□ -2.11
RGA1P39083 FIG2YCR089W 4830 nt1.84□□□□□ -2.12
RGA1P39083 PEP1YBL017C 4740 nt1.83□□□□□ -2.12
RGA1P39083 DNF3YMR162C 4971 nt1.82□□□□□ -2.12
RGA1P39083 FAB1YFR019W 6837 nt1.81□□□□□ -2.12
RGA1P39083 NUP145YGL092W 3954 nt1.81□□□□□ -2.12
RGA1P39083 YLL006W-AYLL006W-A 177 nt1.8□□□□□ -2.12
RGA1P39083 YLR399W-AYLR399W-A 105 nt1.8□□□□□ -2.12
RGA1P39083 MLP2YIL149C 5040 nt1.79□□□□□ -2.12
RGA1P39083 YKL145W-AYKL145W-A 93 nt1.78□□□□□ -2.12
RGA1P39083 YMR272W-BYMR272W-B 108 nt1.78□□□□□ -2.12
RGA1P39083 snR58snR58 96 nt1.77□□□□□ -2.13
RGA1P39083 NUP192YJL039C 5052 nt1.77□□□□□ -2.13
RGA1P39083 VAM6YDL077C 3150 nt1.75□□□□□ -2.13
RGA1P39083 CDC39YCR093W 6327 nt1.73□□□□□ -2.13
RGA1P39083 PMD1YER132C 5262 nt1.73□□□□□ -2.13
RGA1P39083 NUP188YML103C 4968 nt1.72□□□□□ -2.13
RGA1P39083 THO2YNL139C 4794 nt1.69□□□□□ -2.14
RGA1P39083 YOR335W-AYOR335W-A 81 nt1.68□□□□□ -2.14
RGA1P39083 YNL284C-BYNL284C-B 5268 nt1.65□□□□□ -2.15
RGA1P39083 CFT1YDR301W 4074 nt1.65□□□□□ -2.15
RGA1P39083 BRR2YER172C 6492 nt1.64□□□□□ -2.15
RGA1P39083 MEC1YBR136W 7107 nt1.58□□□□□ -2.16
RGA1P39083 IRA1YBR140C 9279 nt1.57□□□□□ -2.16
RGA1P39083 SSK2YNR031C 4740 nt1.56□□□□□ -2.16
RGA1P39083 LAA1YJL207C 6045 nt1.56□□□□□ -2.16
RGA1P39083 YPR117WYPR117W 7470 nt1.53□□□□□ -2.17
RGA1P39083 snR6snR6 112 nt1.52□□□□□ -2.17
RGA1P39083 BUD3YCL014W 4911 nt1.48□□□□□ -2.17
RGA1P39083 SPT7YBR081C 3999 nt1.45□□□□□ -2.18
RGA1P39083 snR73snR73 106 nt1.45□□□□□ -2.18
RGA1P39083 CCH1YGR217W 6120 nt1.44□□□□□ -2.18
RGA1P39083 HKR1YDR420W 5409 nt1.41□□□□□ -2.18
RGA1P39083 tQ(UUG)E2tQ(UUG)E2 72 nt1.38□□□□□ -2.19
RGA1P39083 LTE1YAL024C 4308 nt1.37□□□□□ -2.19
RGA1P39083 PAU9YBL108C-A 129 nt1.3□□□□□ -2.2
RGA1P39083 tH(GUG)E1tH(GUG)E1 72 nt1.26□□□□□ -2.21
RGA1P39083 tH(GUG)E2tH(GUG)E2 72 nt1.26□□□□□ -2.21
RGA1P39083 tH(GUG)G1tH(GUG)G1 72 nt1.26□□□□□ -2.21
RGA1P39083 tH(GUG)G2tH(GUG)G2 72 nt1.26□□□□□ -2.21
RGA1P39083 tH(GUG)HtH(GUG)H 72 nt1.26□□□□□ -2.21
RGA1P39083 tH(GUG)KtH(GUG)K 72 nt1.26□□□□□ -2.21
RGA1P39083 tH(GUG)MtH(GUG)M 72 nt1.26□□□□□ -2.21
RGA1P39083 YML100W-AYML100W-A 174 nt1.26□□□□□ -2.21
RGA1P39083 RKR1YMR247C 4689 nt1.24□□□□□ -2.21
RGA1P39083 snR87snR87 109 nt1.24□□□□□ -2.21
RGA1P39083 ESP1YGR098C 4893 nt1.24□□□□□ -2.21
RGA1P39083 SCC2YDR180W 4482 nt1.18□□□□□ -2.22
RGA1P39083 DOP1YDR141C 5097 nt1.17□□□□□ -2.22
RGA1P39083 YJR029WYJR029W 5268 nt1.13□□□□□ -2.23
RGA1P39083 YPR137C-BYPR137C-B 5268 nt1.13□□□□□ -2.23
RGA1P39083 IML1YJR138W 4755 nt1.12□□□□□ -2.23
RGA1P39083 tV(UAC)BtV(UAC)B 74 nt1.1□□□□□ -2.23
RGA1P39083 tV(UAC)DtV(UAC)D 74 nt1.1□□□□□ -2.23
RGA1P39083 YBL100W-BYBL100W-B 5313 nt1.09□□□□□ -2.24
RGA1P39083 PAU24YBR301W 363 nt1.06□□□□□ -2.24
RGA1P39083 snR161snR161 161 nt1.03□□□□□ -2.24
RGA1P39083 FMP27YLR454W 7887 nt1.01□□□□□ -2.25
RGA1P39083 BEM2YER155C 6504 nt1□□□□□ -2.25
RGA1P39083 EMT1tM(CAU)D 73 nt0.99□□□□□ -2.25
RGA1P39083 EMT5tM(CAU)J1 73 nt0.99□□□□□ -2.25
RGA1P39083 EMT3tM(CAU)J2 73 nt0.99□□□□□ -2.25
RGA1P39083 EMT4tM(CAU)M 73 nt0.99□□□□□ -2.25
RGA1P39083 EMT2tM(CAU)O2 73 nt0.99□□□□□ -2.25
RGA1P39083 IQG1YPL242C 4488 nt0.99□□□□□ -2.25
RGA1P39083 YJL113WYJL113W 4647 nt0.95□□□□□ -2.26
RGA1P39083 MLP1YKR095W 5628 nt0.92□□□□□ -2.26
RGA1P39083 YMR272W-AYMR272W-A 114 nt0.89□□□□□ -2.27
RGA1P39083 YMR315W-AYMR315W-A 108 nt0.85□□□□□ -2.27
RGA1P39083 URB1YKL014C 5295 nt0.84□□□□□ -2.27
RGA1P39083 YOR186C-AYOR186C-A 210 nt0.81□□□□□ -2.28
RGA1P39083 tF(GAA)BtF(GAA)B 73 nt0.8□□□□□ -2.28
RGA1P39083 tF(GAA)FtF(GAA)F 73 nt0.8□□□□□ -2.28
RGA1P39083 tF(GAA)GtF(GAA)G 73 nt0.8□□□□□ -2.28
RGA1P39083 tF(GAA)H1tF(GAA)H1 73 nt0.8□□□□□ -2.28
RGA1P39083 tF(GAA)H2tF(GAA)H2 73 nt0.8□□□□□ -2.28
RGA1P39083 tF(GAA)MtF(GAA)M 73 nt0.8□□□□□ -2.28
RGA1P39083 tF(GAA)P1tF(GAA)P1 73 nt0.8□□□□□ -2.28
RGA1P39083 tF(GAA)P2tF(GAA)P2 73 nt0.8□□□□□ -2.28
RGA1P39083 UTP20YBL004W 7482 nt0.79□□□□□ -2.28
RGA1P39083 CDC65tQ(CUG)M 72 nt0.76□□□□□ -2.29
RGA1P39083 tA(UGC)QtA(UGC)Q 76 nt0.74□□□□□ -2.29
RGA1P39083 YPR159C-AYPR159C-A 102 nt0.74□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms