Protein–RNA interactions for Protein: P38859

DNA2, DNA replication ATP-dependent helicase/nuclease DNA2, yeastyeast

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNA2P38859 snR77snR77 88 nt-2.01□□□□□ -2.73
DNA2P38859 tR(UCU)Q1tR(UCU)Q1 73 nt-2.02□□□□□ -2.73
DNA2P38859 YOR381W-AYOR381W-A 168 nt-2.02□□□□□ -2.73
DNA2P38859 YLR286W-AYLR286W-A 135 nt-2.03□□□□□ -2.73
DNA2P38859 YMR172C-AYMR172C-A 384 nt-2.04□□□□□ -2.74
DNA2P38859 YAL063C-AYAL063C-A 291 nt-2.09□□□□□ -2.74
DNA2P38859 ATP19YOL077W-A 207 nt-2.1□□□□□ -2.75
DNA2P38859 YDL159C-BYDL159C-B 177 nt-2.11□□□□□ -2.75
DNA2P38859 YEL014CYEL014C 306 nt-2.12□□□□□ -2.75
DNA2P38859 YGR035CYGR035C 351 nt-2.16□□□□□ -2.75
DNA2P38859 YMR315W-AYMR315W-A 108 nt-2.16□□□□□ -2.75
DNA2P38859 YBR178WYBR178W 375 nt-2.17□□□□□ -2.76
DNA2P38859 YAL016C-BYAL016C-B 186 nt-2.2□□□□□ -2.76
DNA2P38859 YBR182C-AYBR182C-A 195 nt-2.2□□□□□ -2.76
DNA2P38859 YOR329W-AYOR329W-A 210 nt-2.21□□□□□ -2.76
DNA2P38859 YDR183C-AYDR183C-A 258 nt-2.24□□□□□ -2.77
DNA2P38859 snR78snR78 87 nt-2.27□□□□□ -2.77
DNA2P38859 YOR293C-AYOR293C-A 150 nt-2.27□□□□□ -2.77
DNA2P38859 YJR157WYJR157W 363 nt-2.27□□□□□ -2.77
DNA2P38859 YBR196C-AYBR196C-A 150 nt-2.29□□□□□ -2.78
DNA2P38859 YBR131C-AYBR131C-A 90 nt-2.32□□□□□ -2.78
DNA2P38859 YEL050W-AYEL050W-A 192 nt-2.33□□□□□ -2.78
DNA2P38859 YLR299C-AYLR299C-A 93 nt-2.37□□□□□ -2.79
DNA2P38859 YOR376W-AYOR376W-A 156 nt-2.37□□□□□ -2.79
DNA2P38859 tF(GAA)QtF(GAA)Q 75 nt-2.38□□□□□ -2.79
DNA2P38859 YER181CYER181C 324 nt-2.4□□□□□ -2.79
DNA2P38859 YOR102WYOR102W 351 nt-2.45□□□□□ -2.8
DNA2P38859 YPR197CYPR197C 564 nt-2.45□□□□□ -2.8
DNA2P38859 YLR222C-AYLR222C-A 231 nt-2.46□□□□□ -2.8
DNA2P38859 YDR413CYDR413C 576 nt-2.49□□□□□ -2.81
DNA2P38859 YOR309CYOR309C 381 nt-2.49□□□□□ -2.81
DNA2P38859 YHR180C-BYHR180C-B 105 nt-2.52□□□□□ -2.81
DNA2P38859 YPL038W-AYPL038W-A 192 nt-2.52□□□□□ -2.81
DNA2P38859 snR55snR55 98 nt-2.54□□□□□ -2.82
DNA2P38859 YLR342W-AYLR342W-A 174 nt-2.54□□□□□ -2.82
DNA2P38859 YOR316C-AYOR316C-A 210 nt-2.54□□□□□ -2.82
DNA2P38859 YGL188C-AYGL188C-A 141 nt-2.55□□□□□ -2.82
DNA2P38859 snR48snR48 113 nt-2.58□□□□□ -2.82
DNA2P38859 RPL39YJL189W 156 nt-2.59□□□□□ -2.82
DNA2P38859 YKL118WYKL118W 312 nt-2.6□□□□□ -2.83
DNA2P38859 YNL097C-BYNL097C-B 123 nt-2.66□□□□□ -2.84
DNA2P38859 tL(UAA)QtL(UAA)Q 85 nt-2.69□□□□□ -2.84
DNA2P38859 YKL106C-AYKL106C-A 120 nt-2.69□□□□□ -2.84
DNA2P38859 YNL277W-AYNL277W-A 189 nt-2.7□□□□□ -2.84
DNA2P38859 YPR012WYPR012W 255 nt-2.73□□□□□ -2.85
DNA2P38859 YDR157WYDR157W 402 nt-2.76□□□□□ -2.85
DNA2P38859 YDR524W-CYDR524W-C 90 nt-2.78□□□□□ -2.85
DNA2P38859 YDL240C-AYDL240C-A 138 nt-2.78□□□□□ -2.86
DNA2P38859 YOL155W-AYOL155W-A 135 nt-2.81□□□□□ -2.86
DNA2P38859 snR52snR52 92 nt-2.81□□□□□ -2.86
DNA2P38859 YOR302WYOR302W 78 nt-2.83□□□□□ -2.86
DNA2P38859 YJL150WYJL150W 303 nt-2.86□□□□□ -2.87
DNA2P38859 YHL015W-AYHL015W-A 84 nt-2.88□□□□□ -2.87
DNA2P38859 YOL083C-AYOL083C-A 141 nt-2.88□□□□□ -2.87
DNA2P38859 GIM4YEL003W 336 nt-2.92□□□□□ -2.88
DNA2P38859 YJR162CYJR162C 351 nt-2.95□□□□□ -2.88
DNA2P38859 YNL198CYNL198C 303 nt-2.95□□□□□ -2.88
DNA2P38859 YNL337WYNL337W 255 nt-2.95□□□□□ -2.88
DNA2P38859 YBR109W-AYBR109W-A 225 nt-2.96□□□□□ -2.88
DNA2P38859 RPL41AYDL184C 78 nt-2.97□□□□□ -2.88
DNA2P38859 snR56snR56 88 nt-2.99□□□□□ -2.89
DNA2P38859 snR6snR6 112 nt-3□□□□□ -2.89
DNA2P38859 YBR296C-AYBR296C-A 120 nt-3□□□□□ -2.89
DNA2P38859 Q0017Q0017 162 nt-3.03□□□□□ -2.9
DNA2P38859 snR80snR80 171 nt-3.08□□□□□ -2.9
DNA2P38859 YDR118W-AYDR118W-A 117 nt-3.09□□□□□ -2.9
DNA2P38859 SOM1YEL059C-A 225 nt-3.09□□□□□ -2.9
DNA2P38859 YPL152W-AYPL152W-A 99 nt-3.15□□□□□ -2.91
DNA2P38859 snR38snR38 95 nt-3.16□□□□□ -2.92
DNA2P38859 RPL41BYDL133C-A 78 nt-3.17□□□□□ -2.92
DNA2P38859 YCR095W-AYCR095W-A 159 nt-3.19□□□□□ -2.92
DNA2P38859 snR73snR73 106 nt-3.21□□□□□ -2.92
DNA2P38859 YOR335W-AYOR335W-A 81 nt-3.21□□□□□ -2.92
DNA2P38859 snR65snR65 100 nt-3.23□□□□□ -2.93
DNA2P38859 VAR1Q0140 1197 nt-3.34□□□□□ -2.94
DNA2P38859 YOL164W-AYOL164W-A 183 nt-3.35□□□□□ -2.95
DNA2P38859 YGR151CYGR151C 336 nt-3.37□□□□□ -2.95
DNA2P38859 YBL071C-BYBL071C-B 99 nt-3.38□□□□□ -2.95
DNA2P38859 YDR406W-AYDR406W-A 246 nt-3.39□□□□□ -2.95
DNA2P38859 YBL053WYBL053W 375 nt-3.44□□□□□ -2.96
DNA2P38859 YDR524C-AYDR524C-A 120 nt-3.44□□□□□ -2.96
DNA2P38859 snR47snR47 99 nt-3.44□□□□□ -2.96
DNA2P38859 snR85snR85 171 nt-3.55□□□□□ -2.98
DNA2P38859 YDL114W-AYDL114W-A 114 nt-3.57□□□□□ -2.98
DNA2P38859 tV(UAC)QtV(UAC)Q 76 nt-3.58□□□□□ -2.98
DNA2P38859 YBL100W-CYBL100W-C 120 nt-3.61□□□□□ -2.99
DNA2P38859 YAL037C-AYAL037C-A 93 nt-3.63□□□□□ -2.99
DNA2P38859 YOR231C-AYOR231C-A 201 nt-3.7□□□□□ -3
DNA2P38859 YKL225WYKL225W 348 nt-3.71□□□□□ -3
DNA2P38859 tS(GCU)Q1tS(GCU)Q1 86 nt-3.81□□□□□ -3.02
DNA2P38859 SPG3YDR504C 384 nt-3.82□□□□□ -3.02
DNA2P38859 YHR175W-AYHR175W-A 150 nt-3.88□□□□□ -3.03
DNA2P38859 YCL001W-BYCL001W-B 255 nt-3.92□□□□□ -3.04
DNA2P38859 snR87snR87 109 nt-3.93□□□□□ -3.04
DNA2P38859 YMR046W-AYMR046W-A 129 nt-4.05□□□□□ -3.06
DNA2P38859 tR(ACG)Q2tR(ACG)Q2 74 nt-4.06□□□□□ -3.06
DNA2P38859 YDL159W-AYDL159W-A 132 nt-4.11□□□□□ -3.07
DNA2P38859 YGR122C-AYGR122C-A 129 nt-4.11□□□□□ -3.07
DNA2P38859 YKL096C-BYKL096C-B 150 nt-4.12□□□□□ -3.07
DNA2P38859 snR58snR58 96 nt-4.18□□□□□ -3.08
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms